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SCNpilot_expt_500_bf_scaffold_11872

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11872_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..689
DNA (687bp) protein (229aa)
UPI0003D63C30 related cluster n=1 Tax=unknown RepID=UPI0003D63C30
Amino acid ABC transporter {ECO:0000313|EMBL:KKB07941.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
amino acid ABC transporter, periplasmic amino acid-binding protein
SCNpilot_expt_500_bf_scaffold_11872_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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867..1685
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364CA32 rbh
Amino acid ABC transporter {ECO:0000313|EMBL:KKB07942.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_11872_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1764..2294
DNA (531bp) protein (177aa)
Protein creA n=1 Tax=Rhizobium sp. RepID=L0NG52_RHISP
CREA protein {ECO:0000313|EMBL:KKB07943.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_11872_4
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2462..2905
DNA (444bp) protein (148aa)
Alkyl hydroperoxide reductase subunit C-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDW4_PELHB
Peroxidase {ECO:0000313|EMBL:KKC31898.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
alkyl hydroperoxide reductase
SCNpilot_expt_500_bf_scaffold_11872_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2902..3033
DNA (132bp) protein (44aa)
peroxidase (EC:1.11.1.7)
peroxidase n=1 Tax=Amorphus coralli RepID=UPI00035EE58E
Peroxidase {ECO:0000313|EMBL:KFL32323.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_11872_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3459..3812
DNA (354bp) protein (118aa)
Rare lipoprotein A n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9SC18_9RHOB
Lipoprotein {ECO:0000313|EMBL:KKB07944.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
lipoprotein A domain-containing protein; K03642 rare lipoprotein A
SCNpilot_expt_500_bf_scaffold_11872_7
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3891..4571)
DNA (681bp) protein (227aa)
N-(5'phosphoribosyl)anthranilate isomerase; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] rbh
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI0002FF1CFA rbh
SCNpilot_expt_500_bf_scaffold_11872_8
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4587..5441)
DNA (855bp) protein (285aa)
Transcriptional regulator, RpiR family n=2 Tax=Sinorhizobium medicae RepID=A6UGP6_SINMW rbh
RpiR family transcriptional regulator rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABR62826.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_500_bf_scaffold_11872_9
unknown

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5576..5698
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying 9 items

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