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SCNpilot_expt_500_bf_scaffold_5842

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5842_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..294)
DNA (294bp) protein (98aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI3_PELHB
SCNpilot_expt_500_bf_scaffold_5842_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(564..2639)
DNA (2076bp) protein (692aa)
oligopeptidase B; K01354 oligopeptidase B [EC:3.4.21.83] rbh
Protease II n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI4_PELHB rbh
Peptidase S9 {ECO:0000313|EMBL:KKB09013.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_5842_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2906..3715
DNA (810bp) protein (270aa)
Na(+) H(+) antiporter subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI6_PELHB
Monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:KKB82708.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Na(+) H(+) antiporter subunit A; K05565 multicomponent Na+:H+ antiporter subunit A
SCNpilot_expt_500_bf_scaffold_5842_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..5238
DNA (1527bp) protein (509aa)
Na(+) H(+) antiporter subunit A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI6_PELHB rbh
Monovalent cation/H+ antiporter subunit A {ECO:0000313|EMBL:KFL29391.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Na(+) H(+) antiporter subunit A; K05565 multicomponent Na+:H+ antiporter subunit A rbh
SCNpilot_expt_500_bf_scaffold_5842_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5235..5663
DNA (429bp) protein (143aa)
Na(+) H(+) antiporter subunit B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI7_PELHB
Monovalent cation/H+ antiporter subunit B {ECO:0000313|EMBL:KFL29390.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Na(+) H(+) antiporter subunit B; K05566 multicomponent Na+:H+ antiporter subunit B
SCNpilot_expt_500_bf_scaffold_5842_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5663..6040
DNA (378bp) protein (126aa)
Na(+) H(+) antiporter subunit C n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI8_PELHB
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KKB09015.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Na(+) H(+) antiporter subunit C; K05567 multicomponent Na+:H+ antiporter subunit C
SCNpilot_expt_500_bf_scaffold_5842_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6847..7611
DNA (765bp) protein (255aa)
Na(+) H(+) antiporter subunit D n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCI9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB09016.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Na(+) H(+) antiporter subunit D; K05568 multicomponent Na+:H+ antiporter subunit D
SCNpilot_expt_500_bf_scaffold_5842_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7608..8087
DNA (480bp) protein (160aa)
Na(+) H(+) antiporter subunit E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ0_PELHB
Cation:proton antiporter {ECO:0000313|EMBL:KKB76438.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Na(+) H(+) antiporter subunit E; K05569 multicomponent Na+:H+ antiporter subunit E
SCNpilot_expt_500_bf_scaffold_5842_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8084..8395
DNA (312bp) protein (104aa)
Multisubunit Na+/H+ antiporter subunit F n=2 Tax=Rhizobium RepID=U4Q5J4_9RHIZ
Cation:proton antiporter {ECO:0000313|EMBL:KKB76437.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
mnhF; multisubunit Na+/H+ antiporter subunit F
SCNpilot_expt_500_bf_scaffold_5842_10
unknown

Not on your lists

8382..8483
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5842_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8811..9230
DNA (420bp) protein (140aa)
Transcriptional regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ3_PELHB
MucR family transcriptional regulator {ECO:0000313|EMBL:KKB09019.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
transcriptional regulator
SCNpilot_expt_500_bf_scaffold_5842_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9611..9976
DNA (366bp) protein (122aa)
DnaA-related protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3F7_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:KKB10222.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5842_13
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9966..10466
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ5_PELHB
DNA replication initiation ATPase {ECO:0000313|EMBL:KFC71396.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5842_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10544..11572
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76435.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
acetyltransferase protein
SCNpilot_expt_500_bf_scaffold_5842_15
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11576..12004)
DNA (429bp) protein (143aa)
Sulfur acceptor protein SufE for iron-sulfur cluster assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ6_PELHB
Cysteine desufuration protein SufE {ECO:0000313|EMBL:KKB83926.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
sulfur acceptor protein SufE for iron-sulfur cluster assembly; K02426 cysteine desulfuration protein SufE
SCNpilot_expt_500_bf_scaffold_5842_16
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12094..12549)
DNA (456bp) protein (152aa)
Nucleoside diphosphate kinase regulator n=1 Tax=Rhizobium lupini HPC(L) RepID=K5DQC7_RHILU
Uncharacterized protein {ECO:0000313|EMBL:KKB80350.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
SCNpilot_expt_500_bf_scaffold_5842_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12928..13134)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003631B99
Uncharacterized protein {ECO:0000313|EMBL:KFL32574.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5842_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13507..13809)
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB09022.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_5842_19
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14243..15436
DNA (1194bp) protein (398aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
multi-sensor signal transduction histidine kinase; K11357 two-component system, cell cycle sensor histidine kinase DivJ [EC:2.7.13.3]
Multi-sensor signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCJ7_PELHB
Displaying 19 items

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