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SCNpilot_expt_500_bf_scaffold_3428

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3428_1
unknown

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1..177
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_3428_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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188..883
DNA (696bp) protein (232aa)
Flagellar basal-body rod modification protein FlgD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R928_PELHB
Flagellar basal-body rod modification protein FlgD {ECO:0000313|EMBL:KFC62439.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
flagellar basal body rod modification protein FlgD; K02389 flagellar basal-body rod modification protein FlgD
SCNpilot_expt_500_bf_scaffold_3428_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1086..1364
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R929_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB07445.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3428_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2055..3659
DNA (1605bp) protein (535aa)
Flagellar M-ring protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R930_PELHB
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
SCNpilot_expt_500_bf_scaffold_3428_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3665..4726
DNA (1062bp) protein (354aa)
Flagellar motor switch protein FliG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R931_PELHB
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
SCNpilot_expt_500_bf_scaffold_3428_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4729..5424
DNA (696bp) protein (232aa)
FlbE protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R932_PELHB
FlbE protein {ECO:0000313|EMBL:KFC62434.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
FlbE protein; K02411 flagellar assembly protein FliH
SCNpilot_expt_500_bf_scaffold_3428_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5421..5765
DNA (345bp) protein (115aa)
Flagellar motor switch protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P3G3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKB07447.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_expt_500_bf_scaffold_3428_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5778..7145
DNA (1368bp) protein (456aa)
Transcriptional regulatory protein flbD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R934_PELHB
ATPase AAA {ECO:0000313|EMBL:KKB07448.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
transcriptional regulatory protein flbD
SCNpilot_expt_500_bf_scaffold_3428_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7295..9313
DNA (2019bp) protein (673aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R935_PELHB
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:KKB07449.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
SCNpilot_expt_500_bf_scaffold_3428_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9351..10097
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V76_SOLUE
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KKB13706.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_3428_11
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10235..11179
DNA (945bp) protein (315aa)
antibiotic ABC transporter substrate-binding protein n=1 Tax=Salinispora pacifica RepID=UPI00038136CB rbh
Iron-enterobactin transporter periplasmic binding protein {ECO:0000313|EMBL:EFM59661.1}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
iron-enterobactin transporter periplasmic binding protein; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_3428_12
Vibrio furnissii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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11225..12268
DNA (1044bp) protein (348aa)
Ferric vibriobactin, enterobactin transport system, permease protein ViuD n=1 Tax=Vibrio fluvialis I21563 RepID=S7IJA5_VIBFL rbh
ferric vibriobactin ABC transporter, permease protein; K02015 iron complex transport system permease protein rbh
Ferric vibriobactin ABC transporter, permease protein {ECO:0000313|EMBL:ADT86652.1}; TaxID=903510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio furnissii (strain DSM 14383 / NCTC 11218).;"
SCNpilot_expt_500_bf_scaffold_3428_13
Photorhabdus temperata, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12265..13326
DNA (1062bp) protein (354aa)
Ferric enterobactin transport protein fepg n=2 Tax=Photorhabdus temperata RepID=T0PBU9_PHOTE rbh
ABC transporter permease {ECO:0000313|EMBL:ERT13726.1}; TaxID=1389415 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus temperata J3.;"
ferric vibriobactin ABC transporter, permease protein; K02015 iron complex transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_3428_14
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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13335..14576
DNA (1242bp) protein (414aa)
monooxygenase, NtaA/SnaA/SoxA family (EC:1.14.13.-)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI000368943B rbh
FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family {ECO:0000313|EMBL:EZP53276.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
SCNpilot_expt_500_bf_scaffold_3428_15
Pseudomonas xanthomarina, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14587..15060)
DNA (474bp) protein (158aa)
Putative hydrolase of alpha/beta superfamily protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2UJI0_PSEST
Putative hydrolase of alpha/beta superfamily protein {ECO:0000313|EMBL:CEG53991.1}; TaxID=271420 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas xanthomarina.;"
putative hydrolase of alpha/beta superfamily protein
SCNpilot_expt_500_bf_scaffold_3428_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15406..15645
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TK08_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KKB07451.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
Displaying 16 items

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