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SCNpilot_expt_500_bf_scaffold_3481

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3481_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(103..1128)
DNA (1026bp) protein (342aa)
Flagellar motor rotation protein MotB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W2_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07410.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
flagellar motor rotation protein MotB; K02557 chemotaxis protein MotB rbh
SCNpilot_expt_500_bf_scaffold_3481_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1133..2128)
DNA (996bp) protein (332aa)
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W1_PELHB rbh
Flagellar motor protein MotA {ECO:0000313|EMBL:KFL29255.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
MotA/TolQ/ExbB proton channel family protein, probably associated with flagella rbh
SCNpilot_expt_500_bf_scaffold_3481_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2211..3032
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDY7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC67715.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3481_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3110..3904)
DNA (795bp) protein (265aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol-1-monophosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9W0_PELHB
Inositol monophosphatase {ECO:0000313|EMBL:KKB07408.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_3481_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4044..5162)
DNA (1119bp) protein (373aa)
TPR repeat, SEL1 subfamily n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9V8_PELHB rbh
TPR repeat, SEL1 subfamily {ECO:0000313|EMBL:KFC67719.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein; K07126 rbh
SCNpilot_expt_500_bf_scaffold_3481_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5159..5764)
DNA (606bp) protein (202aa)
Thiamine phosphate pyrophosphorylase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZLX4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFL29253.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
thiamine phosphate pyrophosphorylase
SCNpilot_expt_500_bf_scaffold_3481_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5942..6970)
DNA (1029bp) protein (343aa)
fructose-bisphosphate aldolase; K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
Fructose-bisphosphate aldolase class I n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9V6_PELHB
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:KFL29252.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_3481_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7752..8195)
DNA (444bp) protein (148aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HM44_9RHIZ
SCNpilot_expt_500_bf_scaffold_3481_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8227..8919)
DNA (693bp) protein (231aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9V2_PELHB
SCNpilot_expt_500_bf_scaffold_3481_10
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9194..10111)
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Methylobacterium sp. 77 RepID=UPI00038203EE rbh
LysR family transcriptional regulator
Tax=RBG_16_Alphaproteobacteria_64_48_curated
SCNpilot_expt_500_bf_scaffold_3481_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10296..10931
DNA (636bp) protein (212aa)
glutathione S-transferase n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B40DA2
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SCNpilot_expt_500_bf_scaffold_3481_12
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11387..12583)
DNA (1197bp) protein (399aa)
Putative flavoprotein monooxygenase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SY73_9BRAD
Putative flavoprotein monooxygenase {ECO:0000313|EMBL:CCD99150.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
Displaying 12 items

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