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SCNpilot_expt_500_bf_scaffold_4377

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4377_1
unknown

Not on your lists

217..528
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4377_2
unknown

Not on your lists

comp(529..1389)
DNA (861bp) protein (287aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4377_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2685..3284
DNA (600bp) protein (200aa)
3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
Dna-3-methyladenine glycosylase 1 n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CRF6_9RHOB
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KFL32620.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_4377_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3809..4051)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB79524.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_expt_500_bf_scaffold_4377_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4048..4917)
DNA (870bp) protein (290aa)
CaAX amino protease family protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWR3_AZOBR rbh
caAX amino protease family protein rbh
CaAX amino protease family protein {ECO:0000313|EMBL:CCD02322.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
SCNpilot_expt_500_bf_scaffold_4377_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4926..5549)
DNA (624bp) protein (208aa)
Putative transcriptional regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AWR2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:AIB15355.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative transcriptional regulator
SCNpilot_expt_500_bf_scaffold_4377_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..7277)
DNA (747bp) protein (249aa)
fabG; 3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier protein) reductase n=2 Tax=Agrobacterium RepID=A9CFQ0_AGRT5
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KKB11042.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_expt_500_bf_scaffold_4377_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7412..8470)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035D01B8
Uncharacterized protein {ECO:0000313|EMBL:KKB80893.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4377_9
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8907..9368)
DNA (462bp) protein (154aa)
Tripartite tricarboxylate transporter TctB family n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0BDZ5_RHILV
Uncharacterized protein {ECO:0000313|EMBL:KKB80652.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4377_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9450..10418)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000379F7B9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB80891.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4377_11
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10569..12104
DNA (1536bp) protein (512aa)
Putative C4-dicarboxylate transport sensor protein DctB n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZHP3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB80890.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
putative C4-dicarboxylate transport sensor protein DctB
SCNpilot_expt_500_bf_scaffold_4377_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12347..13135
DNA (789bp) protein (263aa)
Fis family transcriptional regulator n=1 Tax=Pseudomonas sp. CMAA1215 RepID=U7A3G1_9PSED
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KFL30657.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dctD; C4-dicarboxylate transport transcriptional regulatory protein DctD; K10126 two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Displaying 12 items

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