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SCNpilot_expt_500_bf_scaffold_4520

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4520_1
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

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2..631
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00035D1AAC
peptidoglycan-associated (lipo)protein
Tax=GWD2_Elusimicrobia_63_28_curated
SCNpilot_expt_500_bf_scaffold_4520_2
unknown

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674..1357
DNA (684bp) protein (228aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4520_3
bacterium YEK0313, Bacteria

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1344..1760
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003792354
Uncharacterized protein {ECO:0000313|EMBL:CEJ13580.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_expt_500_bf_scaffold_4520_4
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2085..3527
DNA (1443bp) protein (481aa)
Putative PAS sensor two-component histidine kinase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YM27_MOBAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB80007.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sensor histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_4520_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3520..3903
DNA (384bp) protein (128aa)
Response regulator receiver protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11GQ0_MESSB
Uncharacterized protein {ECO:0000313|EMBL:KKB80006.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
response regulator receiver protein
SCNpilot_expt_500_bf_scaffold_4520_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4011..4349
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL29018.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
SCNpilot_expt_500_bf_scaffold_4520_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4346..4675
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5T5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFL29017.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4520_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4913..5443
DNA (531bp) protein (177aa)
Alpha/beta hydrolase fold protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG13_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29016.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
alpha/beta hydrolase
SCNpilot_expt_500_bf_scaffold_4520_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6013..6819)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W5E2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KFC64381.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4520_10
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6886..8016)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG09_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFC66392.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4520_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8243..10417)
DNA (2175bp) protein (725aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
katG; catalase peroxidase (EC:1.11.1.21) rbh
Catalase-peroxidase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q447_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_4520_12
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10511..11182
DNA (672bp) protein (224aa)
Hydrogen peroxide-inducible genes activator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG11_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB84940.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hydrogen peroxide-inducible genes activator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
SCNpilot_expt_500_bf_scaffold_4520_13
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11308..12009)
DNA (702bp) protein (234aa)
Protein rarD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG12_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL29015.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
protein rarD; K05786 chloramphenicol-sensitive protein RarD
SCNpilot_expt_500_bf_scaffold_4520_14
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12441..12887
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JDR6_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:KKB80452.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4520_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13151..13840
DNA (690bp) protein (230aa)
Transcriptional regulator, ArsR family / methyltransferase fusion n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG08_PELHB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB10012.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ArsR family transcriptional regulator / methyltransferase fusion; K03892 ArsR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_4520_16
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13813..14073
DNA (261bp) protein (87aa)
Transcriptional regulator, ArsR family / methyltransferase fusion n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG08_PELHB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB10012.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ArsR family transcriptional regulator / methyltransferase fusion; K03892 ArsR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_4520_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14462..14941
DNA (480bp) protein (160aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
5,10-methylenetetrahydrofolate reductase; K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG07_PELHB
SCNpilot_expt_500_bf_scaffold_4520_18
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15148..15924
DNA (777bp) protein (259aa)
Putative uncharacterized protein C498R n=1 Tax=Paramecium bursaria Chlorella virus AR158 RepID=A7RBV1_PBCVA
Uncharacterized protein {ECO:0000313|EMBL:KKB79999.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
poly(hydroxyalkanoate) granule-associated protein
SCNpilot_expt_500_bf_scaffold_4520_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16027..16773
DNA (747bp) protein (249aa)
DnaJ-like protein DjlA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG05_PELHB
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KKB10009.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DnaJ-like protein DjlA; K05801 DnaJ like chaperone protein
SCNpilot_expt_500_bf_scaffold_4520_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17277..18377
DNA (1101bp) protein (367aa)
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-] rbh
Putative Carboxynorspermidine decarboxylase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHV8_9RHIZ
SCNpilot_expt_500_bf_scaffold_4520_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18676..19650
DNA (975bp) protein (325aa)
lys1; saccharopine dehydrogenase (EC:1.5.1.7) rbh
saccharopine dehydrogenase n=1 Tax=Pseudomonas fuscovaginae RepID=UPI0002F717F0 rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:KKB10008.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_4520_22
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19814..20905
DNA (1092bp) protein (364aa)
monooxygenase, Cytochrome P450 (EC:1.14.14.1)
Putative monooxygenase, Cytochrome P450 n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CCG6_METED
Uncharacterized protein {ECO:0000313|EMBL:KKB10238.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Displaying 22 items

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