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SCNpilot_expt_500_bf_scaffold_4799

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4799_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..462
DNA (462bp) protein (154aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA18_PELHB
Haloacid dehalogenase {ECO:0000313|EMBL:KKB08063.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
HAD superfamily hydrolase
SCNpilot_expt_500_bf_scaffold_4799_2
unknown

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comp(683..775)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_4799_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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826..1671
DNA (846bp) protein (282aa)
Putative signal peptide protein {ECO:0000313|EMBL:KFC64411.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Cell wall hydrolase SleB id=2844375 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
cell wall hydrolase SleB
SCNpilot_expt_500_bf_scaffold_4799_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1781..2986
DNA (1206bp) protein (402aa)
23S rRNA (uracil-5-) -methyltransferase RumA; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] rbh
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA33_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08341.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_4799_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3191..3577
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REE0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB78708.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4799_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4461)
DNA (825bp) protein (275aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Rhizobium sp. CF142 RepID=J2L5J4_9RHIZ rbh
Endonuclease {ECO:0000313|EMBL:KKB07904.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4799_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4458..5627)
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003801D91 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB07903.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_4799_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5783..6934)
DNA (1152bp) protein (384aa)
Plasmid pSfHH103e complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AFQ3_RHIFH rbh
Oxidoreductase {ECO:0000313|EMBL:KKB07902.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
glycosyl hydrolase family 109 protein rbh
Displaying 8 items

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