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SCNpilot_expt_500_bf_scaffold_4822

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4822_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..665)
DNA (663bp) protein (221aa)
membrane protein n=1 Tax=Rhizobium radiobacter RepID=UPI0003694768
Acetylserine transporter {ECO:0000313|EMBL:KKB78981.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
eamA; putative amino-acid metabolite efflux pump
SCNpilot_expt_500_bf_scaffold_4822_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(864..1907)
DNA (1044bp) protein (348aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E2_PELHB
SCNpilot_expt_500_bf_scaffold_4822_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2175..3365
DNA (1191bp) protein (397aa)
HI0933 family protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJM0_CAUST
Membrane protein {ECO:0000313|EMBL:KKB07725.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein; K07007
SCNpilot_expt_500_bf_scaffold_4822_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3388..3942)
DNA (555bp) protein (185aa)
Lipid A 3-O-deacylase (PagL) n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTF9_9RHIZ
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:KFC68560.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
SCNpilot_expt_500_bf_scaffold_4822_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4081..4668)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6E0_PELHB
Lipid A 3-O-deacylase-related protein {ECO:0000313|EMBL:KFC68561.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4822_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4889..5899
DNA (1011bp) protein (337aa)
Luciferase-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6D8_PELHB rbh
5,10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:KKB07724.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
luciferase-like protein rbh
SCNpilot_expt_500_bf_scaffold_4822_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6013..7227
DNA (1215bp) protein (405aa)
Diguanylate cyclase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WIB6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKB78911.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
diguanylate cyclase
SCNpilot_expt_500_bf_scaffold_4822_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7233..7511)
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB07722.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_4822_9
unknown

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comp(7629..7712)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 9 items

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