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SCNpilot_expt_500_bf_scaffold_2378

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2378_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..603)
DNA (603bp) protein (201aa)
NADP-dependent aryl-alcohol dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000379CF95
Alcohol dehydrogenase {ECO:0000313|EMBL:KKB08079.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2378_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1053..1445)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI00035CB58F
Extradiol dioxygenase {ECO:0000313|EMBL:KKB77881.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2378_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1664..3220
DNA (1557bp) protein (519aa)
Putative binding-protein-dependent transport protein (Periplasmic) n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V7R0_9RHOB rbh
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32907.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative binding-protein-dependent transport protein (periplasmic); K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_2378_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3480..4460
DNA (981bp) protein (327aa)
ABC transporter permease n=1 Tax=Loktanella vestfoldensis RepID=UPI00035F02E5 rbh
ABC transporter permease {ECO:0000313|EMBL:KFL32906.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
Peptide ABC transporter, permease protein, putative; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_2378_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4465..5424
DNA (960bp) protein (320aa)
peptide ABC transporter permease n=1 Tax=Loktanella vestfoldensis RepID=UPI000379830F rbh
ABC transporter permease {ECO:0000313|EMBL:KFL32905.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
dipeptide transport system permease DppC; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_2378_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5424..7064
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI000382C83E rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB08073.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter nucleotide binding/ATPase protein; K02031 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_2378_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7214..7939
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003B2E9FF
Uncharacterized protein {ECO:0000313|EMBL:KKB08071.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2378_8
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7958..10546)
DNA (2589bp) protein (863aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPK1_9RHIZ rbh
Histidine kinase {ECO:0000313|EMBL:KKB08377.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
diguanylate cyclase (GGDEF) domain-containing protein rbh
SCNpilot_expt_500_bf_scaffold_2378_9
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10797..11168)
DNA (372bp) protein (124aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1); K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
methylmalonyl-CoA epimerase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E93646
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKB08070.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2378_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11165..13279)
DNA (2115bp) protein (705aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KKB08069.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KKB08069.1};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
methylmalonyl-CoA mutase; K01847 methylmalonyl-CoA mutase [EC:5.4.99.2] rbh
Methylmalonyl-CoA mutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Q9_PELHB rbh
SCNpilot_expt_500_bf_scaffold_2378_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13454..15436)
DNA (1983bp) protein (661aa)
propionyl-CoA carboxylase biotin-containing subunit; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] rbh
Propionyl-CoA carboxylase biotin-containing subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R0_PELHB rbh
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KKB08068.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2378_12
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15448..16980)
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase carboxyl transferase subunit; K01966 propionyl-CoA carboxylase beta chain [EC:6.4.1.3] rbh
Propionyl-CoA carboxylase carboxyl transferase subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6R1_PELHB rbh
Methylmalonyl-CoA carboxyltransferase {ECO:0000313|EMBL:KKB08067.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_2378_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17106..18518
DNA (1413bp) protein (471aa)
Transcriptional regulator, XRE family n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CWP5_9RHOB rbh
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KKB08066.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DNA-binding protein; K07110 rbh
SCNpilot_expt_500_bf_scaffold_2378_14
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18524..18904)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00035EFF08
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ06009.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
SCNpilot_expt_500_bf_scaffold_2378_15
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18984..19538)
DNA (555bp) protein (185aa)
acetyltransferase n=1 Tax=Loktanella hongkongensis RepID=UPI00036E3457
Uncharacterized protein {ECO:0000313|EMBL:KKB08065.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative phenylacetic acid degradation protein
SCNpilot_expt_500_bf_scaffold_2378_16
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19550..19975)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IAZ4_METNO
Selenoprotein O {ECO:0000313|EMBL:KKB86741.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
Displaying 16 items

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