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SCNpilot_expt_500_bf_scaffold_7599

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7599_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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102..641
DNA (540bp) protein (180aa)
Putative epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHH6_9RHIZ
Isomerase {ECO:0000313|EMBL:KFL31552.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
xylose isomerase family protein
SCNpilot_expt_500_bf_scaffold_7599_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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598..921
DNA (324bp) protein (108aa)
Putative epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHH6_9RHIZ
Isomerase {ECO:0000313|EMBL:KFL31552.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
xylose isomerase family protein
SCNpilot_expt_500_bf_scaffold_7599_3
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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918..2432
DNA (1515bp) protein (505aa)
D-ribose transporter ATP binding protein n=1 Tax=Wenxinia marina RepID=UPI00037311A9 rbh
Sugar ABC transporter ATPase {ECO:0000313|EMBL:KFL31551.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC-type sugar transport system rbh
SCNpilot_expt_500_bf_scaffold_7599_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2429..3415
DNA (987bp) protein (329aa)
Inner-membrane translocator n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUP5_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KFL31550.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
monosaccharide ABC transporter membrane protein; K10440 ribose transport system permease protein
SCNpilot_expt_500_bf_scaffold_7599_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3412..4398
DNA (987bp) protein (329aa)
Putative membrane protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TUP4_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KFL31549.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
monosaccharide ABC transporter membrane protein
SCNpilot_expt_500_bf_scaffold_7599_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4466..5602
DNA (1137bp) protein (379aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF39_9RHIZ rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL31548.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
substrate-binding component of ABC transporter rbh
SCNpilot_expt_500_bf_scaffold_7599_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5827..6744
DNA (918bp) protein (306aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCY0_MICTS
TMAO reductase system periplasmic protein TorT {ECO:0000313|EMBL:KJL28815.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_7599_8
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6741..6965
DNA (225bp) protein (75aa)
ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Ribose import ATP-binding protein rbsA 2 n=2 Tax=Ochrobactrum intermedium RepID=C4WLD7_9RHIZ
Ribose import ATP-binding protein rbsA 2 {ECO:0000313|EMBL:EEQ92959.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Displaying 8 items

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