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SCNpilot_expt_500_bf_scaffold_2245_9

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(8715..9116)

Top 3 Functional Annotations

Value Algorithm Source
Permease YjgP/YjgQ n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGK3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 130.0
  • Bit_score: 67
  • Evalue 1.50e-08
Uncharacterized protein {ECO:0000313|EMBL:KKB09179.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 131.0
  • Bit_score: 151
  • Evalue 6.40e-34
permease YjgP/YjgQ; K07091 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 130.0
  • Bit_score: 67
  • Evalue 4.70e-09

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGGCGCGCTGCAACATCAGCGTCGATAGCCTGAGCCAGCCTCTTGCGGCCGGCGATCCCTTGTCGGAGACCGACAGCTTCCAGATGGTGCGCCAGGCTATGGAGACCGGGGAATGGACACCCGAAATCACCAAGCGTCTGCTCGATCGTTCGGCCGAGGGACTGCGGGTGATCGCGATATGTCTCCTGGCCCTGGCGCTGGCCGGTTTTCCCTCGGGACGGCGCACGCGGGTGCGGCTGCCGCTGGAAGCCATCGTCATGCTCTGCGGTTTCGCCGAACGCGGACTCAGTGCCTATAGCCCCCTTGGCATGGGCACCGGCGCAGTTATTCTGATCCTCATATCCGGCGTCGTCCTGGCCGTGCGGCTGTGGCCGCGCCCAATTATCGAGGAGCCGGCATGA
PROTEIN sequence
Length: 134
MARCNISVDSLSQPLAAGDPLSETDSFQMVRQAMETGEWTPEITKRLLDRSAEGLRVIAICLLALALAGFPSGRRTRVRLPLEAIVMLCGFAERGLSAYSPLGMGTGAVILILISGVVLAVRLWPRPIIEEPA*