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SCNpilot_expt_500_bf_scaffold_2388_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 931..1140

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU3_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 127
  • Evalue 6.30e-27
Cold-shock protein {ECO:0000313|EMBL:KKB10424.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 1.30e-30
cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 69.0
  • Bit_score: 127
  • Evalue 2.00e-27

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCAACTGGCACCGTTAAGTGGTTCAACGGCCAAAAGGGATATGGCTTCATTCAGCCGGACGAGGGTGGGGCCGACGTGTTCGTCCACATTTCCGCTGTCCAGCGGTCCGGTCTCAATGGCCTGGATGAGGGCCAGAAGGTCACCTACGAAATCGTCAAGGACAAGCGGACCGGCAAATCCGCCGCCGACAATCTGGTCGCCGGCTGA
PROTEIN sequence
Length: 70
MATGTVKWFNGQKGYGFIQPDEGGADVFVHISAVQRSGLNGLDEGQKVTYEIVKDKRTGKSAADNLVAG*