ggKbase home page

SCNpilot_expt_500_bf_scaffold_2327_8

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 8623..9318

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JQG3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 206.0
  • Bit_score: 120
  • Evalue 2.50e-24
Uncharacterized protein {ECO:0000313|EMBL:KKB78411.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.4
  • Coverage: 190.0
  • Bit_score: 134
  • Evalue 1.40e-28
probabable exopolysaccharide transport protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 236.0
  • Bit_score: 111
  • Evalue 3.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGACCTCGGTGCATCAGTCTATCCTCATGTCGCGCCCCAAGGCCGCAGAGCCGCCCAAGCCGGAAACGCTGGCTGACCGTTTGGCTGGCATCGATGCGTGGACGGCGCTGGGCTGGGTCAAGCGGTTTTGGTGGATAGCGGCGGGTTGTGCCTTTGCCGGGGTGTTTGCCGGCTACTCCTTCGGAACGCTGGTGCCCGCGCGATACACCACCTATGCCGATATTCTGCTCTACACGTCGGTCGCCTCGAGCGCCGACGATCCGATGTTCGGGCAGGGCCAGGCGCGTGATGCGCAATTGCTGACTGCCGAAAGCCGCAACCATGTGCTCTCGTCGGGCAATGTGATGGCGCGCGCGGTGGCTGATCTCGATCTCGCCAACGATCCCGAATTTGCCGGCACGAGCGGCAGCGACGAGGACCGCCAGTTGGCAGCCCGACGCACGCTGACCGAACGGGTGACCACGACGCGCGGGCTCAACTCGCTGATGACCACACTTTCGGTGTGGGCGGAAAGCCCTGAAAAGGCCGTTGCCGTATCCAACGGCGTCGTCGCGGCTTTCCAGGCAGAGCTGGCGGCCATGGACGCGAACTCGGTCGATGGGCTGACGAAGAAGCGGTCGAGGCCTATCGTTCGGAAAACCGACTGGAAGCCACCAATGGGGAGTCGCTCGACAATCAGTCGATCGCCCAGGTGA
PROTEIN sequence
Length: 232
MTSVHQSILMSRPKAAEPPKPETLADRLAGIDAWTALGWVKRFWWIAAGCAFAGVFAGYSFGTLVPARYTTYADILLYTSVASSADDPMFGQGQARDAQLLTAESRNHVLSSGNVMARAVADLDLANDPEFAGTSGSDEDRQLAARRTLTERVTTTRGLNSLMTTLSVWAESPEKAVAVSNGVVAAFQAELAAMDANSVDGLTKKRSRPIVRKTDWKPPMGSRSTISRSPR*