ggKbase home page

SCNpilot_expt_500_bf_scaffold_2327

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2327_1
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1075)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000380A138
Uncharacterized protein {ECO:0000313|EMBL:KEC80848.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2327_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1132..2100)
DNA (969bp) protein (323aa)
UDP-hexose transferase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U5F3_RHIRD rbh
UDP-hexose transferase {ECO:0000313|EMBL:EGP57754.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
putative glycosyltransferase rbh
SCNpilot_expt_500_bf_scaffold_2327_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..3060)
DNA (909bp) protein (303aa)
Polypeptide N-acetylgalactosaminyltransferase 1 {ECO:0000313|EMBL:KJX87703.1}; EC=2.4.1.41 {ECO:0000313|EMBL:KJX87703.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
UDP-hexose transferase n=2 Tax=Agrobacterium RepID=A9CHX6_AGRT5 rbh
exoU; UDP-hexose transferase rbh
SCNpilot_expt_500_bf_scaffold_2327_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3236..4300
DNA (1065bp) protein (355aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
xynA; endo-1,4-beta-xylanase; K01181 endo-1,4-beta-xylanase [EC:3.2.1.8] rbh
endo-1,4-beta-xylanase n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI0003718631 rbh
SCNpilot_expt_500_bf_scaffold_2327_5
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4300..5373
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 224MFTsu3.1 RepID=UPI000364E4B4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHH03044.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2327_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5367..6806)
DNA (1440bp) protein (480aa)
Sugar transferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIY9_NITHX
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ABE63808.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_2327_7
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6848..8200)
DNA (1353bp) protein (451aa)
Polysaccharide biosynthesis protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5D0U8_RHILU rbh
Uncharacterized protein {ECO:0000313|EMBL:KIV62255.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. UR51a.;"
Membrane protein involved in the export of O-antigen and teichoic acid rbh
SCNpilot_expt_500_bf_scaffold_2327_8
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8623..9318
DNA (696bp) protein (232aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JQG3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB78411.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
probabable exopolysaccharide transport protein
SCNpilot_expt_500_bf_scaffold_2327_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9315..9980
DNA (666bp) protein (222aa)
UPI0003CF2570 related cluster n=1 Tax=unknown RepID=UPI0003CF2570
Uncharacterized protein {ECO:0000313|EMBL:ESW84485.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
lipopolysaccharide biosynthesis protein
SCNpilot_expt_500_bf_scaffold_2327_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10001..10744
DNA (744bp) protein (248aa)
Exopolysaccharide production protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U4N4_RHIRD
Exopolysaccharide production protein {ECO:0000313|EMBL:CDN95943.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
exoQ; exopolysaccharide production protein
Displaying 10 items

View Taxonomy