ggKbase home page

SCNpilot_expt_500_bf_scaffold_2222_4

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 1996..2352

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QDK5_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 114.0
  • Bit_score: 128
  • Evalue 6.30e-27
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 114.0
  • Bit_score: 128
  • Evalue 2.00e-27
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADX47565.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 114.0
  • Bit_score: 128
  • Evalue 8.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGCAGATCGGCGAACTGGCGGAACGCTCCGGGCTAAGCCGCGACACGCTGCGCTTCTACGAGAAGCGTGGGCTCATTGCCTCCTTGCGCCGCCCGAATGGCTATCGCCACTATCCGGACGAGACGCTGATGTTGCTGAACTATGTCCGCACCGCGCAGCGGCTGGGCTTTTCACTGGCAGAGATCGAAACCGAGCTACCGGCGGCCGGGGAAAACCTGCCTGGCGCAGCGCGGCTCGCCGACCTCTTGCGCCACAAGATCTCCTCGATCGATAGCCGCATCGCTGAGCTGCAAGGCCTCAGAGACGACCTCGCCACCCGACTCGATCTGGCCTGCCCGCTCGGCGTTGAAAACTAG
PROTEIN sequence
Length: 119
MQIGELAERSGLSRDTLRFYEKRGLIASLRRPNGYRHYPDETLMLLNYVRTAQRLGFSLAEIETELPAAGENLPGAARLADLLRHKISSIDSRIAELQGLRDDLATRLDLACPLGVEN*