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SCNpilot_expt_500_bf_scaffold_3738_6

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 4585..5127

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 179.0
  • Bit_score: 306
  • Evalue 2.10e-80
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 180.0
  • Bit_score: 272
  • Evalue 7.50e-71
ribosomal large subunit pseudouridine synthase E n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9A7 similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 180.0
  • Bit_score: 278
  • Evalue 4.40e-72

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCGCGCCTTATCCTCTTCAACAAGCCGTTCAATGTCCTCACCCAGTTTACCGGCGAAGGCCGGACACTGGCGGAGTTCATCACCGTGCCGGGGGTCTATGCCGCCGGCCGGCTGGACAAGGACAGCGAAGGGCTGCTGCTGCTGACCGATGACGGCAGGTTGCAGGCGCGGATTGCCGACCCGAAATTCAAGCTGGAAAAGACTTATCTGGTGCAGGTGGAAGGGGTGCCGACACCCGAGGCGCTGGAGCGTCTGCGCCGGGGCGTAGAACTCAATGATGGGCCGACGCGGCCGGCCAAGGCGGAAATGATCGAGCCACCCGAACTCTGGCCGCGCGATCCGCCGGTGCGGTTTCGCAAGAGCGTGCCGGACAGCTGGCTGTCGCTCACCATCAGCGAGGGACGCAATAGGCAGGTGCGGCGGATGACGGCGGCAGTGGGTTTCCCGACACTGCGGCTGGTGCGCTGGCGCATCGGGGAGTGGACGCTGGACGGACTGGGGCCCGGAGACTGGCGCGAGACCGGGCCCAAGCGGCGCTGA
PROTEIN sequence
Length: 181
MSRLILFNKPFNVLTQFTGEGRTLAEFITVPGVYAAGRLDKDSEGLLLLTDDGRLQARIADPKFKLEKTYLVQVEGVPTPEALERLRRGVELNDGPTRPAKAEMIEPPELWPRDPPVRFRKSVPDSWLSLTISEGRNRQVRRMTAAVGFPTLRLVRWRIGEWTLDGLGPGDWRETGPKRR*