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SCNpilot_expt_500_bf_scaffold_3738

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3738_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..394
DNA (393bp) protein (131aa)
Streptomycin phosphotransferase, streptomycin-resistance n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA90_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB06751.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
streptomycin phosphotransferase, streptomycin-resistance
SCNpilot_expt_500_bf_scaffold_3738_2
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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416..925
DNA (510bp) protein (170aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB76772.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3738_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1038..1964
DNA (927bp) protein (309aa)
Pirin domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V201_9BRAD
Pirin {ECO:0000313|EMBL:KKB08588.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Pirin-like protein; K06911
SCNpilot_expt_500_bf_scaffold_3738_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2022..3494)
DNA (1473bp) protein (491aa)
putative soluble pyridine nucleotide transhydrogenase; K00322 NAD(P) transhydrogenase [EC:1.6.1.1] rbh
Putative soluble pyridine nucleotide transhydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INS5_9SPHN rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KKB08587.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_3738_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3564..4430)
DNA (867bp) protein (289aa)
Decarboxylase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD4_PELHB rbh
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KKB10157.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
decarboxylase; K06966 rbh
SCNpilot_expt_500_bf_scaffold_3738_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4585..5127
DNA (543bp) protein (181aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-); K06181 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
ribosomal large subunit pseudouridine synthase E n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9A7
SCNpilot_expt_500_bf_scaffold_3738_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5201..5764)
DNA (564bp) protein (188aa)
UPI0003CDEB5E related cluster n=1 Tax=unknown RepID=UPI0003CDEB5E
Fasciclin {ECO:0000313|EMBL:KKB75909.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
beta-Ig-H3/fasciclin
SCNpilot_expt_500_bf_scaffold_3738_8
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5976..6692)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGD9_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB81709.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3738_9
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6689..6877)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Loktanella vestfoldensis RepID=UPI00035DBB93
RNA polymerase sigma factor {ECO:0000313|EMBL:KKC31049.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Displaying 9 items

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