ggKbase home page

SCNpilot_expt_500_bf_scaffold_3973_8

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 6190..6405

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspA n=1 Tax=Loktanella cinnabarina LL-001 RepID=U2Z994_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 69.0
  • Bit_score: 106
  • Evalue 1.50e-20
Cold-shock protein {ECO:0000313|EMBL:KKB08592.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 71.0
  • Bit_score: 136
  • Evalue 1.50e-29
cold shock family protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 64.0
  • Bit_score: 101
  • Evalue 1.60e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGCCACTCACAAGGGCACCGTAAAGTTCTTCAACACCACCAAGGGTTTCGGTTTCGTCACCCCTGACAATGGCGGCAAGGACCACTTCGTCCACATCTCTGCCGTTCAGCGTTCGGGCATCGACGGTCTCTACGAGAACGACAAGATCTCGTACGAAGTCGAAACCGGCCGTGACGGTCGCGAGTCCGCTGTCAATCTGGTTCTCGAGAAGTAA
PROTEIN sequence
Length: 72
MATHKGTVKFFNTTKGFGFVTPDNGGKDHFVHISAVQRSGIDGLYENDKISYEVETGRDGRESAVNLVLEK*