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SCNpilot_expt_500_bf_scaffold_4139_10

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(5822..6040)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=3 Tax=Rhizobium fredii RepID=C3MFX5_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 72.0
  • Bit_score: 144
  • Evalue 5.20e-32
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 148
  • Evalue 5.00e-33
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 72.0
  • Bit_score: 144
  • Evalue 1.60e-32

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGGCCAAGGAAGAAGTGCTCGAATTTCCGGGCGTGGTCACCGAATTGCTTCCCAACGCGACCTTTCGGGTCAAGCTGGAAAACGATCACGAGATTATCGCCCACACTGCCGGTCGCATGCGCAAGAACCGCATCCGCGTTCTCGCCGGCGACAAGGTGCTGTGCGAAATGACCCCTTACGACCTCACCAAGGGTCGCATCACCTATCGCTTCAAGTGA
PROTEIN sequence
Length: 73
MAKEEVLEFPGVVTELLPNATFRVKLENDHEIIAHTAGRMRKNRIRVLAGDKVLCEMTPYDLTKGRITYRFK*