ggKbase home page

SCNpilot_expt_500_bf_scaffold_4139

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_4139_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..908)
DNA (906bp) protein (302aa)
Putative Pilus assembly protein cpaC n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08182.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
putative Pilus assembly protein cpaC; K02280 pilus assembly protein CpaC
SCNpilot_expt_500_bf_scaffold_4139_2
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(924..1859)
DNA (936bp) protein (312aa)
Flp pilus assembly protein RcpC/CpaB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS2_PELHB
Flp pilus assembly protein RcpC/CpaB {ECO:0000313|EMBL:KFC61313.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Flp pilus assembly protein RcpC/CpaB; K02279 pilus assembly protein CpaB
SCNpilot_expt_500_bf_scaffold_4139_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2099..2599)
DNA (501bp) protein (167aa)
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D693BE
Peptidase {ECO:0000313|EMBL:KKB13168.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_expt_500_bf_scaffold_4139_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2722..2928)
DNA (207bp) protein (69aa)
Component of type IV pilus, pilin subunit protein n=2 Tax=Rhizobium etli RepID=Q2KDR0_RHIEC
Pilus assembly protein {ECO:0000313|EMBL:KKB08180.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
pilA; component of type IV pilus, pilin subunit protein; K02651 pilus assembly protein Flp/PilA
SCNpilot_expt_500_bf_scaffold_4139_5
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3316..3765
DNA (450bp) protein (150aa)
Secretin RcpA/CpaC-like protein, associated with Flp pilus assembly n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFR8_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08179.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
secretin RcpA/CpaC-like protein, associated with Flp pilus assembly
SCNpilot_expt_500_bf_scaffold_4139_6
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3892..4410
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Hirschia maritima RepID=UPI00037BC35A
Uncharacterized protein {ECO:0000313|EMBL:KKB08178.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_4139_7
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4410..4988
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RHK6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB08177.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4139_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4998..5174)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DCC088
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein; K09862 hypothetical protein
SCNpilot_expt_500_bf_scaffold_4139_9
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5174..5812)
DNA (639bp) protein (213aa)
Maf-like protein KKY_404 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA88_PELHB
Maf-like protein JP75_11455 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
septum formation protein Maf; K06287 septum formation protein
SCNpilot_expt_500_bf_scaffold_4139_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5822..6040)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Rhizobium fredii RepID=C3MFX5_RHISN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_expt_500_bf_scaffold_4139_11
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..7076)
DNA (960bp) protein (320aa)
Arsenate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M2_PELHB
Arsenate reductase {ECO:0000313|EMBL:KFC68450.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
arsenate reductase
SCNpilot_expt_500_bf_scaffold_4139_12
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7085..8377)
DNA (1293bp) protein (431aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M1_PELHB rbh
SCNpilot_expt_500_bf_scaffold_4139_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8391..8822)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB08653.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_4139_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9008..10381
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037E77D8 rbh
Putative oxidoreductase {ECO:0000313|EMBL:CDP53048.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
Displaying 14 items

View Taxonomy