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SCNpilot_expt_500_bf_scaffold_5379_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(318..989)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 213.0
  • Bit_score: 310
  • Evalue 1.70e-81
  • rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB08159.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 222.0
  • Bit_score: 404
  • Evalue 7.00e-110
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 213.0
  • Bit_score: 310
  • Evalue 5.30e-82
  • rbh

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGACGCGCCGCCGTATCATCATTGTCGACGATCATCCGCTGTTTCGGGCCGCGCTGCGGCAGACGCTTGCGGGCGGTGATGCCACGGTCAGTGTCGAGGAAGCTGGCGATCTCAACAGCCTGAGCGCCGCGCTCGATGCCGACCGCGATTGCGACCTGGTGCTGCTCGATCTCAATATGCCGGGCGTGCGCGGCTTTTCGGGCCTGCTGCTGCTGCGTGCGCAATATCCCGATATTCCGGTGATGATCATCTCGGCGGTGGAGGACTCCACCGTGGTGCGCCGCGCCTTCGAGCTGGGCGCTGCCGGCTATCTGCACAAATCCGAAGGCCCCACCGAAATCCGTCGCGCCATCGAGACTGTGCTCTCCGGTGAGGTTTTCGTTCCGGCGGGGACCACGCTGGGTGGCGAGGACGATCACACGGCGCTGATGAAGCGGCTGGCGACGCTGACGCCACAACAGGTGCGCGTCCTGATGATGTTGAGCGATGGCCTCATGAACAAGCAGATCGCCTATGAGCTCACCATTTCCGAGGCGACGGTGAAGGCCCACGTCTCCGCCATCCTGCAAAAGCTCGATGTCGACAGTCGCACCCAGGCGGTGATCGCCGCCGCCCGCATCGAGGAAGGCCAGTTCGAGGCGCTGTTCTCGACCAGCGGCGACAAGAGCTGA
PROTEIN sequence
Length: 224
MTRRRIIIVDDHPLFRAALRQTLAGGDATVSVEEAGDLNSLSAALDADRDCDLVLLDLNMPGVRGFSGLLLLRAQYPDIPVMIISAVEDSTVVRRAFELGAAGYLHKSEGPTEIRRAIETVLSGEVFVPAGTTLGGEDDHTALMKRLATLTPQQVRVLMMLSDGLMNKQIAYELTISEATVKAHVSAILQKLDVDSRTQAVIAAARIEEGQFEALFSTSGDKS*