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SCNpilot_expt_500_bf_scaffold_5379

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5379_1
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SNV8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKB08160.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_5379_2
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(318..989)
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K6_PELHB rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KKB08159.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
LuxR family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_5379_3
unknown

Not on your lists

comp(1086..1781)
DNA (696bp) protein (232aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5379_4
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1816..4686
DNA (2871bp) protein (957aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K3_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL31020.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
peptidoglycan binding domain-containing protein; K13582 localization factor PodJL rbh
SCNpilot_expt_500_bf_scaffold_5379_5
unknown

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comp(4733..5677)
DNA (945bp) protein (315aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5379_6
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5934..6500
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL31024.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5379_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6510..7217)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9K0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC33391.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein; K06953
SCNpilot_expt_500_bf_scaffold_5379_8
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7368..7802
DNA (435bp) protein (145aa)
Ribonucleotide-diphosphate reductase alpha subunit n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E617_9RHOB
Membrane bound FAD containing D-sorbitol dehydrogenase {ECO:0000313|EMBL:AKH99040.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
oxidoreductase
SCNpilot_expt_500_bf_scaffold_5379_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7806..9422
DNA (1617bp) protein (539aa)
FAD dependent oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1B2_STAND rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADH89470.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_500_bf_scaffold_5379_10
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9435..11291)
DNA (1857bp) protein (619aa)
helicase domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
Helicase domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J9_PELHB
Helicase {ECO:0000313|EMBL:KKB08156.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
SCNpilot_expt_500_bf_scaffold_5379_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12086..12373
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IIM0_BEII9
Uncharacterized protein {ECO:0000313|EMBL:KKB08155.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5379_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12375..13049
DNA (675bp) protein (225aa)
nucleoside triphosphate hydrolase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI0003818FE0
Uncharacterized protein {ECO:0000313|EMBL:KKC33282.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
putative fructose transport system kinase
SCNpilot_expt_500_bf_scaffold_5379_13
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13115..14476
DNA (1362bp) protein (454aa)
DNA-damage-inducible protein F n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J6_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB08154.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
DNA-damage-inducible protein F rbh
SCNpilot_expt_500_bf_scaffold_5379_14
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14459..14710)
DNA (252bp) protein (84aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00054567}; EC=1.3.-.- {ECO:0000256|SAAS:SAAS00276934};; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
Dihydroorotate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J5_PELHB
SCNpilot_expt_500_bf_scaffold_5379_15
unknown

Not on your lists

15126..15482
DNA (357bp) protein (119aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5379_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15512..15880)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000376429E
Uncharacterized protein {ECO:0000313|EMBL:KFL31031.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5379_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16058..16705
DNA (648bp) protein (216aa)
Phage repressor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9J3_PELHB rbh
DNA-binding protein {ECO:0000313|EMBL:KKB08152.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
phage repressor rbh
SCNpilot_expt_500_bf_scaffold_5379_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16750..17085
DNA (336bp) protein (112aa)
Aminoglycoside N(6')-acetyltransferase type 1 {ECO:0000256|PIRNR:PIRNR000452}; EC=2.3.1.82 {ECO:0000256|PIRNR:PIRNR000452};; Aminoglycoside resistance protein {ECO:0000256|PIRNR:PIRNR000452}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
GNAT family acetyltransferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPX3_9SPHN
aminoglycoside N(6')-acetyltransferase
Displaying 18 items

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