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SCNpilot_expt_500_bf_scaffold_5409_10

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(5320..6405)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDN2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 32.9
  • Coverage: 371.0
  • Bit_score: 176
  • Evalue 4.70e-41
Uncharacterized protein {ECO:0000313|EMBL:KKB76618.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 361.0
  • Bit_score: 218
  • Evalue 1.20e-53
Transcriptional regulator, LuxR family protein similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 365.0
  • Bit_score: 146
  • Evalue 1.20e-32

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Taxonomy

Devosia soli → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGACCGACGTTCTGAAGATGCTCGACCATGTCTATGAGGCGGGAGCTGATCCCGCACTCTGGCCTTCTGTCATGGCGCATCTCGCCGATGCTCTTGGCGCCCGCGAGGCGGTGCTGGGAGGCCTCGCGCTGGGGCAGACGCCGCTCTTCGTGGCGCCCCGCACCGACCCCGTCATGGTCGAAAGCTATGTCGCCCATTACCACGCGCAGAATCCGGTTCCGGCCGCCATGCGGGGCCAGGGGCTCAACCAGGTGCGCAGCGACGACGAACTCACCGATATCGAAGCCTTCCGGCGCAGTGCTTTTTTCAACGAATGGTGCGTCGTGCAAGGTTTTTTTCATGGCGCAGCGGTCAATGTCGCGTCGGGCGGCATCCTGGGCACGATCATGGTGAATTCTGTGCGGGCGCTCGATACTGCTGAGCTTGTCGCCTTTCAGCAGGTGGCCCCGCATCTGTCGCGCGCCTTACGCATCAATCAGCTCCTGATGGAAAGCCGCGCGGCGACGCTGAGCGCTTTTTCCGCGCTCGACATGACGGAGCGGGCGGTGTTTCTGGTCGATGCAGAGGGGCGGATTTCGGCCGGAAATACCTTGGCCGAAAACCTGGTTGGTCCGGGCAAGAGCCTGGTGCTGAGCAGGGGGCGGCTGACCTGCCATGCGCCTGCCGACACGGTGCGGCTGCAGCGGCTGGTGCAGCAATGCCTGTCCGGCCGGCTCGCTCAGCCTAATGCGACGCTCGACATTGCCCGCGAACCAAATCGCGCGCCATTGCAACTGGCCTGCCTACCAGTGACCGACGAAAGCGGCATACAGGCGCGTGCCGGATCGGTGCGGCTGATGCTCATCGTCAGCGATCCGGAAGAACGATTGCGGCGCAAGGCGGAACGTTTCGGTCAAGCCTATCGCCTTACGCCGGCGGAGGCCCATGTGGTACTTGAGCTCGCCATTGGCGGCGACCGCAGTGCATTGGCCGAGCGGCTGGGCATTTCCATCGCCACGGTGCGCAGCCAGCTCACCAGCATATTCGACAAGACCGGGGTGCGCCGGCAGGCGGAGCTGGTGCGCATGCTGATGGATCAGCTCTAG
PROTEIN sequence
Length: 362
MTDVLKMLDHVYEAGADPALWPSVMAHLADALGAREAVLGGLALGQTPLFVAPRTDPVMVESYVAHYHAQNPVPAAMRGQGLNQVRSDDELTDIEAFRRSAFFNEWCVVQGFFHGAAVNVASGGILGTIMVNSVRALDTAELVAFQQVAPHLSRALRINQLLMESRAATLSAFSALDMTERAVFLVDAEGRISAGNTLAENLVGPGKSLVLSRGRLTCHAPADTVRLQRLVQQCLSGRLAQPNATLDIAREPNRAPLQLACLPVTDESGIQARAGSVRLMLIVSDPEERLRRKAERFGQAYRLTPAEAHVVLELAIGGDRSALAERLGISIATVRSQLTSIFDKTGVRRQAELVRMLMDQL*