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SCNpilot_expt_500_bf_scaffold_5409

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5409_1
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1395
DNA (1395bp) protein (465aa)
Putative permease n=1 Tax=Ahrensia sp. R2A130 RepID=E0MLQ4_9RHOB
Permease {ECO:0000313|EMBL:KKB85460.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5409_2
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1577..1819
DNA (243bp) protein (81aa)
30S ribosomal protein S21 n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000344DFC8
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
SCNpilot_expt_500_bf_scaffold_5409_3
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1835..2134)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB80057.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_500_bf_scaffold_5409_4
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2303..2653
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GCC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGB51751.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5409_5
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2687..2941)
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB78179.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_500_bf_scaffold_5409_6
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3008..3229)
DNA (222bp) protein (74aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H9Z3_ARTCA
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACL38377.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_expt_500_bf_scaffold_5409_7
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3720..4373
DNA (654bp) protein (218aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MKY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KFL29162.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5409_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4370..4615
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GLC3_SPICD
Uncharacterized protein {ECO:0000313|EMBL:KFL29162.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5409_9
unknown

Not on your lists

4869..5315
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5409_10
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5320..6405)
DNA (1086bp) protein (362aa)
LuxR family transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDN2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76618.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Transcriptional regulator, LuxR family protein
SCNpilot_expt_500_bf_scaffold_5409_11
unknown

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6583..6777
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5409_12
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..7703
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KDD2_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKX58781.1}; TaxID=1247725 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
caspase-1, p20
SCNpilot_expt_500_bf_scaffold_5409_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7753..8745)
DNA (993bp) protein (331aa)
Sel1 repeat-containing protein (EC:3.5.2.6); K07126
Sel1 repeat protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM88_9RHIZ
Sel1 repeat protein {ECO:0000313|EMBL:EYR83227.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_500_bf_scaffold_5409_14
unknown

Not on your lists

comp(8781..9143)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5409_15
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9157..9453)
DNA (297bp) protein (99aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K258_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA09004.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
SCNpilot_expt_500_bf_scaffold_5409_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9586..10191
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWD2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83226.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5409_17
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10157..10843)
DNA (687bp) protein (229aa)
adenylate cyclase n=1 Tax=Rhizobium meliloti RepID=UPI0003782029
adenylate/guanylate cyclase with Chase sensor
Adenylate cyclase {ECO:0000313|EMBL:AEH77394.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
Displaying 17 items

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