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SCNpilot_expt_500_bf_scaffold_6178

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6178_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..478)
DNA (477bp) protein (159aa)
inner-membrane translocator (EC:3.6.3.25); K01998 branched-chain amino acid transport system permease protein
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTJ4_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
SCNpilot_expt_500_bf_scaffold_6178_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(482..1342)
DNA (861bp) protein (287aa)
amino acid ABC transporter permease n=1 Tax=Kiloniella laminariae RepID=UPI00036DC1FB rbh
Probable amino-acid transmembrane lipoprotein abc transporter {ECO:0000313|EMBL:EDP64130.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
branched-chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_6178_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1446..2621)
DNA (1176bp) protein (392aa)
high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein (EC:3.4.22.34); K01999 branched-chain amino acid transport system substrate-binding protein rbh
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B7A5A3 rbh
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EDP64131.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
SCNpilot_expt_500_bf_scaffold_6178_4
unknown

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comp(2633..2914)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_6178_5

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comp(3072..3884)
DNA (813bp) protein (271aa)
Putative phytanoyl-CoA dioxygenase n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IVG9_COMT2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKO07633.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phytanoyl-CoA dioxygenase rbh
SCNpilot_expt_500_bf_scaffold_6178_6
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4037..4807
DNA (771bp) protein (257aa)
histidine utilization repressor n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000365B169
hutC; GntR family transcriptional regulator; K05836 GntR family transcriptional regulator, histidine utilization repressor
Histidine utilization transcriptional regulator (Repressor) protein {ECO:0000313|EMBL:KEC77187.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCNpilot_expt_500_bf_scaffold_6178_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5434..6084)
DNA (651bp) protein (217aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZH2_9RHIZ
Displaying 7 items

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