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SCNpilot_expt_500_bf_scaffold_6256

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_6256_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(34..1065)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003784E4F rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KDP75135.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative oxidoreductase rbh
SCNpilot_expt_500_bf_scaffold_6256_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1256..1558)
DNA (303bp) protein (101aa)
50S ribosomal protein L28 n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344F714
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000255|HAMAP-Rule:MF_00373}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_expt_500_bf_scaffold_6256_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1919..2797
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR35_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ37550.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_6256_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3816..4283)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:CDP51774.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCNpilot_expt_500_bf_scaffold_6256_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4949..6577
DNA (1629bp) protein (543aa)
Helicase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2Q1_RHOP2
Helicase {ECO:0000313|EMBL:KIZ42154.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
helicase
SCNpilot_expt_500_bf_scaffold_6256_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6708..6935
DNA (228bp) protein (76aa)
tRNA synthetase RNA-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037CFD86
Uncharacterized protein {ECO:0000313|EMBL:KIZ42153.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_6256_7
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7113..7451
DNA (339bp) protein (113aa)
Ferredoxin n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89XZ8_BRADU
Ferredoxin {ECO:0000313|EMBL:EJZ35079.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
ferredoxin; K05524 ferredoxin
SCNpilot_expt_500_bf_scaffold_6256_8
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7877..8491
DNA (615bp) protein (205aa)
CarD family transcriptional regulator n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IEN9_9BRAD
CarD family transcriptional regulator {ECO:0000313|EMBL:ERF80904.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_6256_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8454..8630
DNA (177bp) protein (59aa)
Transcriptional regulator, CarD family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VG56_RHOPX
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:ADU41780.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_500_bf_scaffold_6256_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8797..9033)
DNA (237bp) protein (79aa)
Peptidase M48, Ste24p n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VF0_RHOP5
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABJ04084.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Displaying 10 items

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