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SCNpilot_expt_500_bf_scaffold_9026

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9026_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..259
DNA (258bp) protein (86aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
msrA; methionine sulfoxide reductase A (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z3J7_BRASO
SCNpilot_expt_500_bf_scaffold_9026_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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403..984
DNA (582bp) protein (194aa)
Polysaccharide export protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IQW9_RHOP2
polysaccharide export protein; K01991 polysaccharide export outer membrane protein
Polysaccharide export protein {ECO:0000313|EMBL:ABD09391.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_expt_500_bf_scaffold_9026_3
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(994..1668)
DNA (675bp) protein (225aa)
Putative carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH) {ECO:0000313|EMBL:CCE01813.1}; EC=3.1.1.45 {ECO:0000313|EMBL:CCE01813.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
carboxymethylenebutenolidase (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Putative carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T5T6_9BRAD
SCNpilot_expt_500_bf_scaffold_9026_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1725..2078)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZV6_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE41633.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_expt_500_bf_scaffold_9026_5
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2413..2901
DNA (489bp) protein (163aa)
RNA polymerase primary sigma factor n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZT8_9BRAD rbh
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJC61710.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
aldehyde dehydrogenase
SCNpilot_expt_500_bf_scaffold_9026_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2898..3698
DNA (801bp) protein (267aa)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5L3_9BRAD
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS34965.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
aldehyde dehydrogenase
Displaying 6 items

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