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SCNpilot_expt_500_bf_scaffold_11856

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11856_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1573
DNA (1572bp) protein (524aa)
Protein translocase subunit SecD n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136I4_RHOPS rbh
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_expt_500_bf_scaffold_11856_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1587..2624
DNA (1038bp) protein (346aa)
Protein-export membrane protein SecF n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMD3_NITHX rbh
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_11856_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2962..3825
DNA (864bp) protein (288aa)
phytoene synthase; K02291 phytoene synthase [EC:2.5.1.32] rbh
Phytoene/squalene synthetase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q830_9BRAD rbh
Phytoene/squalene synthetase {ECO:0000313|EMBL:EIG55936.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_expt_500_bf_scaffold_11856_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4056..5162)
DNA (1107bp) protein (369aa)
Serine/threonine protein kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMD0_NITHX rbh
serine/threonine protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:ABE62617.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_11856_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5178..5834)
DNA (657bp) protein (219aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
gid; tRNA (uracil-5-)-methyltransferase Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HKI7_9BRAD
SCNpilot_expt_500_bf_scaffold_11856_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5831..6601)
DNA (771bp) protein (257aa)
gid; tRNA (uracil-5-)-methyltransferase Gid; K04094 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000255|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000255|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01037}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=TRMFO_RHOP2
SCNpilot_expt_500_bf_scaffold_11856_7
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7340..8173)
DNA (834bp) protein (278aa)
Blr4724 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89L24_BRADU rbh
hypothetical protein rbh
Blr4724 protein {ECO:0000313|EMBL:BAC49989.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_expt_500_bf_scaffold_11856_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8369..8770)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003660661
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE39999.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Displaying 8 items

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