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SCNpilot_expt_500_bf_scaffold_8258

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8258_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1052
DNA (1050bp) protein (350aa)
cytochrome C n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037583C8
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cytochrome b/c1
SCNpilot_expt_500_bf_scaffold_8258_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1351..2025
DNA (675bp) protein (225aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45] rbh
carboxymethylenebutenolidase n=1 Tax=Afipia birgiae RepID=UPI00031CBAB4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS41192.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_8258_3
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2026..2493
DNA (468bp) protein (156aa)
GCN5 family acetyltransferase n=1 Tax=Sinorhizobium medicae RepID=UPI000379E9D1
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABR61111.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_500_bf_scaffold_8258_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2509..3237)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037C00BB
N-acetylglucosamine-1-phosphate uridyltransferase {ECO:0000313|EMBL:KJC61535.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
oxidoreductase
SCNpilot_expt_500_bf_scaffold_8258_5
unknown

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comp(3865..4134)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8258_6
unknown

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4219..4341
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8258_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4469..6631
DNA (2163bp) protein (721aa)
Anthranilate synthase, component I {ECO:0000313|EMBL:ABE63973.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ABE63973.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
anthranilate synthase; K13503 anthranilate synthase [EC:4.1.3.27] rbh
Anthranilate synthase, component I n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QIH4_NITHX rbh
SCNpilot_expt_500_bf_scaffold_8258_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6814..7332
DNA (519bp) protein (173aa)
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00004}; Short=APRT {ECO:0000255|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00004};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Adenine phosphoribosyltransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=APT_NITHX
SCNpilot_expt_500_bf_scaffold_8258_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7365..8033)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07I73_RHOP5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ32637.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_8258_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8091..8672)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IS08_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KIZ32638.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8258_11
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9072..9893)
DNA (822bp) protein (274aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
protease htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SHV2_9BRAD
SCNpilot_expt_500_bf_scaffold_8258_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10405..10965)
DNA (561bp) protein (187aa)
LemA n=2 Tax=Oligotropha carboxidovorans RepID=B6JF23_OLICO
LemA; K03744 LemA protein
LemA family protein {ECO:0000313|EMBL:AEI05821.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_expt_500_bf_scaffold_8258_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11255..11635)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8NWJ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32854.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8258_14
unknown

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11910..12020
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 14 items

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