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SCNpilot_expt_500_bf_scaffold_5849

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5849_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(68..742)
DNA (675bp) protein (225aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Phosphoglycolate phosphatase Gph n=2 Tax=Oligotropha carboxidovorans RepID=F8BQN2_OLICM
SCNpilot_expt_500_bf_scaffold_5849_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(858..3194)
DNA (2337bp) protein (779aa)
salicylyl-CoA 5-hydroxylase; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
salicylyl-CoA 5-hydroxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BEFA3 rbh
Putative flavoprotein oxidoreductase {ECO:0000313|EMBL:AHK45989.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_expt_500_bf_scaffold_5849_3
bacterium YEK0313, Bacteria

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3410..4558
DNA (1149bp) protein (383aa)
Pilus assembly protein CpaD n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5A7_9BRAD rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ11756.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
acyl-CoA dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_5849_4
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4687..6093)
DNA (1407bp) protein (469aa)
Putative AMP-dependent synthetase and ligase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TZH0_9BRAD rbh
Putative AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CCE11858.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
AMP-dependent synthetase and ligase rbh
SCNpilot_expt_500_bf_scaffold_5849_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6217..7371)
DNA (1155bp) protein (385aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WP69_9BRAD rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EJN14505.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5849_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7497..8351
DNA (855bp) protein (285aa)
Transcriptional regulator, IclR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPX2_METNO
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACL56622.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_500_bf_scaffold_5849_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8382..9305)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031C5CCD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39452.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_5849_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9361..10248)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PD26_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39451.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase rbh
SCNpilot_expt_500_bf_scaffold_5849_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10340..12580)
DNA (2241bp) protein (747aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIT6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39450.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein
SCNpilot_expt_500_bf_scaffold_5849_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12742..13614)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFB5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39449.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_5849_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13878..14339)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E9BAB0
Uncharacterized protein {ECO:0000313|EMBL:EKS39448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
Displaying 11 items

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