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SCNpilot_expt_500_bf_scaffold_3695

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3695_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..214)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QI16_NITHX
hypothetical protein; K06872 uncharacterized protein
Membrane protein {ECO:0000313|EMBL:KJZ64616.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
SCNpilot_expt_500_bf_scaffold_3695_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(243..851)
DNA (609bp) protein (203aa)
LemA family protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037D2FE6 rbh
Lipoprotein {ECO:0000313|EMBL:EJZ29293.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
lipoprotein; K03744 LemA protein rbh
SCNpilot_expt_500_bf_scaffold_3695_3
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1025..3352)
DNA (2328bp) protein (776aa)
carbon-monoxide dehydrogenase; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
Carbon-monoxide dehydrogenase large subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HA47_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig173, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49508.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
SCNpilot_expt_500_bf_scaffold_3695_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3417..4301)
DNA (885bp) protein (295aa)
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52] rbh
dihydrodipicolinate synthetase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378BB4B rbh
Putative dihydrodipicolinate synthase {ECO:0000313|EMBL:BAR59075.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
SCNpilot_expt_500_bf_scaffold_3695_5
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4389..5243)
DNA (855bp) protein (285aa)
Transcriptional regulator n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z0R6_9RHIZ rbh
LysR family transcriptional regulator HdfR {ECO:0000313|EMBL:BAQ16592.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
HTH-type transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_3695_6
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5316..6482)
DNA (1167bp) protein (389aa)
Cystathionine gamma-synthase {ECO:0000313|EMBL:BAQ16597.1}; EC=2.5.1.48 {ECO:0000313|EMBL:BAQ16597.1};; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48); K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cystathionine gamma-synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQC6_NITHX
SCNpilot_expt_500_bf_scaffold_3695_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6617..6931)
DNA (315bp) protein (105aa)
cysI; sulfite reductase [NADPH] hemoprotein beta-componentCysI (EC:1.8.1.2); K00381 sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
Sulfite reductase [NADPH] hemoprotein beta-component {ECO:0000255|HAMAP-Rule:MF_01540}; Short=SiR-HP {ECO:0000255|HAMAP-Rule:MF_01540};; Short=SiRHP {ECO:0000255|HAMAP-Rule:MF_01540};; EC=1.8.1.2 {ECO:0000255|HAMAP-Rule:MF_01540};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Sulfite reductase [NADPH] hemoprotein beta-component n=2 Tax=Oligotropha carboxidovorans RepID=CYSI_OLICO
Displaying 7 items

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