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SCNpilot_expt_500_bf_scaffold_10416

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10416_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Phospholipase {ECO:0000313|EMBL:ETR77314.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_expt_500_bf_scaffold_10416_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(303..1475)
DNA (1173bp) protein (391aa)
P-hydroxybenzoate hydroxylase {ECO:0000313|EMBL:CDP54144.1}; EC=1.14.13.2 {ECO:0000313|EMBL:CDP54144.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
P-hydroxybenzoate hydroxylase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] rbh
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003819996
SCNpilot_expt_500_bf_scaffold_10416_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1604..2467
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11F69_MESSB
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDP54143.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_10416_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2490..2687)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SWT2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59724.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10416_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2793..3344
DNA (552bp) protein (184aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
Bll4164 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89MM8_BRADU
Putative short chain dehydrogenase {ECO:0000313|EMBL:KGJ69713.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_expt_500_bf_scaffold_10416_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3466..3837)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YH54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR74950.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10416_7
unknown

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comp(3941..4282)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10416_8
unknown

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4826..5209
DNA (384bp) protein (128aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_10416_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5959..6696
DNA (738bp) protein (246aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WTJ1_9BRAD rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC36124.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
substrate-binding protein; K02016 iron complex transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_10416_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6702..7982)
DNA (1281bp) protein (427aa)
Acetylornithine deacetylase {ECO:0000313|EMBL:KIZ42733.1}; EC=3.5.1.16 {ECO:0000313|EMBL:KIZ42733.1};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16] rbh
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IX49_RHOP2 rbh
Displaying 10 items

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