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SCNpilot_expt_500_bf_scaffold_15974

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_15974_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(217..363)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61379.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_15974_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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514..1065
DNA (552bp) protein (184aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Shikimate kinase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VD0_RHOP5
SCNpilot_expt_500_bf_scaffold_15974_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1137..2282
DNA (1146bp) protein (382aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
aroB; 3-dehydroquinate synthase; K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H6F5_9BRAD
SCNpilot_expt_500_bf_scaffold_15974_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2279..3628
DNA (1350bp) protein (450aa)
DNA-binding protein n=1 Tax=Afipia birgiae RepID=UPI000306FA39 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE61382.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_15974_5
Pseudomonas sp., Proteobacteria, Bacteria

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3686..4369
DNA (684bp) protein (228aa)
3-oxoacyl-ACP reductase n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6UU28_9PSED
3-oxoacyl-ACP reductase; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
putative oxidoreductase, SDR family
SCNpilot_expt_500_bf_scaffold_15974_6
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4400..4666)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NYW0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS33664.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
BolA-like protein; K05527 BolA protein
SCNpilot_expt_500_bf_scaffold_15974_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4797..5357
DNA (561bp) protein (187aa)
Heat shock protein DnaJ-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW1_NITHX
heat shock protein DnaJ-like
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:ABE61386.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_15974_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5472..5744)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQW0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61387.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_15974_9
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5720..6076)
DNA (357bp) protein (119aa)
membrane protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369A354
Membrane protein {ECO:0000313|EMBL:KJC51702.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_15974_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6387..6917
DNA (531bp) protein (177aa)
cobalt chelatase small subunit; K09882 cobaltochelatase CobS [EC:6.6.1.2]
Hydrogenobyrinic acid a,c-diamide cobaltochelatase {ECO:0000313|EMBL:ABJ04096.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ABJ04096.1};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
Hydrogenobyrinic acid a,c-diamide cobaltochelatase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07VD8_RHOP5
Displaying 10 items

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