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SCNpilot_expt_500_bf_scaffold_12422

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_12422_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..625
DNA (624bp) protein (208aa)
multi-sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Multi-sensor signal transduction histidine kinase n=2 Tax=Rhodopseudomonas palustris RepID=B3QIL9_RHOPT
SCNpilot_expt_500_bf_scaffold_12422_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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661..2031
DNA (1371bp) protein (457aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214Q6_RHOPB rbh
two component sigma54 specific Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABD88130.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_expt_500_bf_scaffold_12422_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2061..2918
DNA (858bp) protein (286aa)
D-amino acid aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
D-amino-acid transaminase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGI1_9BRAD
D-amino-acid transaminase {ECO:0000313|EMBL:EKS39864.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_expt_500_bf_scaffold_12422_4
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3108..3356
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=3 Tax=Bradyrhizobiaceae RepID=HFQ_RHOP2
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Displaying 4 items

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