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SCNpilot_expt_500_bf_scaffold_2548

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_2548_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1155
DNA (1155bp) protein (385aa)
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:ABD88231.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ABD88231.1};; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
UDP-phosphate glucose phosphotransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B40108 rbh
sugar transferase rbh
SCNpilot_expt_500_bf_scaffold_2548_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1145..2005
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKJ0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63257.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_2548_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2052..2414
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYY9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34802.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_2548_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2506..3690)
DNA (1185bp) protein (395aa)
Saccharopine dehydrogenase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKI9_NITHX rbh
saccharopine dehydrogenase rbh
Saccharopine dehydrogenase {ECO:0000313|EMBL:ABE63258.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_expt_500_bf_scaffold_2548_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3814..4617)
DNA (804bp) protein (268aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBB2_9BRAD rbh
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ERF81756.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2548_6
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4798..5739
DNA (942bp) protein (314aa)
Putative Acetamidase/Formamidase family protein {ECO:0000313|EMBL:CCE02025.1}; EC=3.5.1.- {ECO:0000313|EMBL:CCE02025.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
Putative Acetamidase/Formamidase family protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T6E8_9BRAD rbh
putative acetamidase/formamidase family protein rbh
SCNpilot_expt_500_bf_scaffold_2548_7
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5897..6814)
DNA (918bp) protein (306aa)
Putative short-chain dehydrogenase {ECO:0000313|EMBL:CCD92522.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCD92522.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
short-chain dehydrogenase (EC:1.1.1.-); K00100 [EC:1.1.1.-] rbh
Putative short-chain dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SE95_9BRAD rbh
SCNpilot_expt_500_bf_scaffold_2548_8
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7040..8059)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI000307F1B0 rbh
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EIM29154.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_2548_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8075..9268)
DNA (1194bp) protein (398aa)
Bll7670 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89CX5_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY55648.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
SCNpilot_expt_500_bf_scaffold_2548_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9315..10529)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036C0C00 rbh
HlyD family secretion protein rbh
Putative type I secretion system membrane fusion protein (MFP) {ECO:0000313|EMBL:KGJ71312.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
Displaying 10 items

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