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SCNpilot_expt_500_bf_scaffold_7865

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7865_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..574)
DNA (573bp) protein (191aa)
cydA; cytochrome d ubiquinol oxidase subunit 1 (EC:1.10.3.-); K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome d ubiquinol oxidase subunit 1 {ECO:0000313|EMBL:AEI07982.1}; EC=1.10.3.- {ECO:0000313|EMBL:AEI07982.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Cytochrome bd ubiquinol oxidase, subunit I n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZZ4_RHOPS
SCNpilot_expt_500_bf_scaffold_7865_2
unknown

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comp(794..997)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_7865_3
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1127..1738)
DNA (612bp) protein (204aa)
RNA polymerase sigma factor (Sigma-70 factor family, ECF subfamily) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TS15_9BRAD rbh
RNA polymerase sigma factor (Sigma-70 factor family, ECF subfamily) {ECO:0000313|EMBL:CCE09253.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_expt_500_bf_scaffold_7865_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1923..2663)
DNA (741bp) protein (247aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CRZ3_9BRAD rbh
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJN11449.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
two-component response regulator rbh
SCNpilot_expt_500_bf_scaffold_7865_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2665..4386)
DNA (1722bp) protein (574aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH85_NITHX rbh
Histidine kinase {ECO:0000313|EMBL:KIZ39904.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
response regulator receiver sensor signal transduction histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_7865_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4356..6455)
DNA (2100bp) protein (700aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
ATP-binding region, ATPase-like n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZZ8_RHOPS rbh
periplasmic sensor signal transduction histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_7865_7
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6838..7278
DNA (441bp) protein (147aa)
sn-glycerol 3-phosphate transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJQ6_9BRAD
sn-glycerol 3-phosphate transport system substrate-binding protein {ECO:0000313|EMBL:ERF84015.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ugpB2; family 1 extracellular solute-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
Displaying 7 items

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