ggKbase home page

SCNpilot_expt_500_bf_scaffold_4809_6

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(4462..5217)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbJ n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 251.0
  • Bit_score: 462
  • Evalue 3.00e-127
  • rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EFI52858.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 251.0
  • Bit_score: 462
  • Evalue 4.20e-127
P-type conjugative transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 248.0
  • Bit_score: 382
  • Evalue 9.40e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 756
ATGACCCTGCGCCAGTCCTGTGCAGCGCGGCTCGCTATCGCGCTGCTTTCCGCGCCGATCATAATTTCGCCCTTCCTCGTCACGACCGCACACGCGCTCATCGTGTTCGATCCGTCGAACTATGCGCAAAACGTGCTGACCGCCGCGCGCGCTCTTCAGCAGATCAACAACCAGATCACCAGCCTGCAAAATCAGGCACAGATGCTCATCAACCAGGCGCGCAACCTGGCGAGCCTGCCGTATTCGGCGCTCCAGCAACTTCAACAGAACGTCCAGCGCACCCAGCAGCTCCTAAGTCAGGCCCAGGGCATCGCGTTCAATGCGCAGCAGATCGACCAGGCGTTCCAAAAACAATACGGCAATGTGGCGATGTCGGCGAGCGATCAGCAACTCGTCGCCGATGCCCGTACCCGCTGGCAGAATACGGTTGGTAGCTTGCAGGACGCGATGCGCGTGCAAGCCGGCGTGGTCGGCAACATAGACGGCAATCGCACGCAAATGGCCACGCTCGTCACCCAGAGCCAAGGGGCGACCGGCGCGTTGCAGGCAACGCAGGCCGGCAACCAGATCCTCGCGCTCCAGTCGCAGCAGCTTTCCGATCTCGTTGCGCTTCTGTCGGCCAACGGTCGCGCGAGCGCGCTGACCGAGGCCGAGCGTGCCACCGCGGCCGAACAGGCGCGCGAGCAACGCCGCCGCTTCCTCACGCCGGGTTCGGGCTACCAGCCTGGCAATGCGCAGATGTTCAACGGCAACTGA
PROTEIN sequence
Length: 252
MTLRQSCAARLAIALLSAPIIISPFLVTTAHALIVFDPSNYAQNVLTAARALQQINNQITSLQNQAQMLINQARNLASLPYSALQQLQQNVQRTQQLLSQAQGIAFNAQQIDQAFQKQYGNVAMSASDQQLVADARTRWQNTVGSLQDAMRVQAGVVGNIDGNRTQMATLVTQSQGATGALQATQAGNQILALQSQQLSDLVALLSANGRASALTEAERATAAEQAREQRRRFLTPGSGYQPGNAQMFNGN*