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SCNpilot_expt_500_bf_scaffold_9649

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9649_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..736
DNA (735bp) protein (245aa)
LacI family transcriptional regulator n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PTA8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL28020.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
LacI family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9649_2
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(984..1787)
DNA (804bp) protein (268aa)
arylesterase (EC:3.1.1.2)
Putative arylesterase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MJS2_RHIL3
Alpha/beta hydrolase {ECO:0000313|EMBL:KKC39669.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
SCNpilot_expt_500_bf_scaffold_9649_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1854..2759)
DNA (906bp) protein (302aa)
Phosphonate metabolism protein PhnM n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q981Q4_RHILO rbh
phosphonate metabolism protein PhnM; K06162 PhnM protein rbh
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:BAB54655.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_expt_500_bf_scaffold_9649_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3072..3416)
DNA (345bp) protein (115aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI0003783BEA
Uncharacterized protein {ECO:0000313|EMBL:KGM35271.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
melR; AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9649_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3413..3949)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003758DDC
AraC family transcriptional regulator {ECO:0000313|EMBL:AHF87466.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
melR; AraC family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_9649_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4126..5334
DNA (1209bp) protein (403aa)
Putative ABC transporter substrate binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0P3_ANATU rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM35263.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_expt_500_bf_scaffold_9649_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5425..6315
DNA (891bp) protein (297aa)
Putative ABC transporter permease protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0P2_ANATU rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM35270.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_9649_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6312..7187
DNA (876bp) protein (292aa)
Putative ABC transporter permease protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0P1_ANATU
Uncharacterized protein {ECO:0000313|EMBL:KGM35262.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_expt_500_bf_scaffold_9649_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7252..8235
DNA (984bp) protein (328aa)
glycoside hydrolase family protein; K07406 alpha-galactosidase [EC:3.2.1.22]
Family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase n=1 Tax=Rhizobium sp. CF142 RepID=J1SZI1_9RHIZ
Alpha-galactosidase {ECO:0000313|EMBL:KGM35261.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_expt_500_bf_scaffold_9649_10
Mesorhizobium sp. LSJC269B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8760..9086)
DNA (327bp) protein (109aa)
UPI0003CDEE3C related cluster n=1 Tax=unknown RepID=UPI0003CDEE3C
NIPSNAP family containing protein {ECO:0000313|EMBL:ESW89432.1}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC269B00.;"
NIPSNAP family containing protein
SCNpilot_expt_500_bf_scaffold_9649_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9373..10173
DNA (801bp) protein (267aa)
Extracellular solute-binding protein family 3 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y412_MESOW rbh
family 3 extracellular solute-binding protein rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:AEH84989.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_expt_500_bf_scaffold_9649_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10248..10358
DNA (111bp) protein (37aa)
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEH84990.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Displaying 12 items

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