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SCNpilot_expt_500_bf_scaffold_9826

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_9826_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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225..1394
DNA (1170bp) protein (390aa)
MFS transporter n=1 Tax=Rhizobium loti RepID=UPI000379911A rbh
MFS transporter {ECO:0000313|EMBL:KFL26648.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
major facilitator superfamily protein rbh
SCNpilot_expt_500_bf_scaffold_9826_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1394..2578
DNA (1185bp) protein (395aa)
major facilitator transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI000381A40D rbh
major facilitator superfamily protein rbh
Major facilitator superfamily protein {ECO:0000313|EMBL:AIC26979.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_expt_500_bf_scaffold_9826_3
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2571..3032
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA36_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13737.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_9826_4
unknown

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3264..4082
DNA (819bp) protein (273aa)
protein involved in cellulose biosynthesis (CelD)-like protein
SCNpilot_expt_500_bf_scaffold_9826_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4085..5221
DNA (1137bp) protein (379aa)
Fucose permease n=1 Tax=Rhizobium sp. CF142 RepID=J1SHP6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB76371.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
major facilitator superfamily MFS_1
SCNpilot_expt_500_bf_scaffold_9826_6
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5351..6973)
DNA (1623bp) protein (541aa)
Metallo-beta-lactamase family protein, RNA-specific n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J0_PELHB
Metallo-beta-lactamase family protein, RNA-specific {ECO:0000313|EMBL:KFC68832.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
metallo-beta-lactamase family protein, RNA-specific; K07576 metallo-beta-lactamase family protein
SCNpilot_expt_500_bf_scaffold_9826_7
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7016..7513)
DNA (498bp) protein (166aa)
DNA binding response regulator PrrA (RegA) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J1_PELHB
Chemotaxis protein CheY {ECO:0000313|EMBL:KKB76372.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
DNA binding response regulator PrrA (RegA); K15012 two-component system, response regulator RegA
SCNpilot_expt_500_bf_scaffold_9826_8
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7564..8862)
DNA (1299bp) protein (433aa)
sensor histidine kinase PrrB (RegB); K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
Sensor histidine kinase PrrB (RegB) n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R8J2_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKC34488.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
SCNpilot_expt_500_bf_scaffold_9826_9

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9008..9355
DNA (348bp) protein (116aa)
Putative transmembrane protein n=1 Tax=uncultured bacterium 1062 RepID=B8R8Z4_9BACT
Putative transmembrane protein {ECO:0000313|EMBL:ACF98150.1}; TaxID=548898 species="Bacteria; environmental samples.;" source="uncultured bacterium 1062.;"
putative cytosolic protein
Displaying 9 items

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