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SCNpilot_expt_500_bf_scaffold_11598

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_11598_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..735)
DNA (735bp) protein (245aa)
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-transporting P-type ATPase n=1 Tax=Sphingobium baderi LL03 RepID=T0HXM4_9SPHN
Copper ABC transporter ATPase {ECO:0000313|EMBL:KFL25354.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_500_bf_scaffold_11598_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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792..1223
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG07156.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
KLTH0D05698p id=24470348 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lachancea thermotolerans genus=Lachancea taxon_order=Saccharomycetales taxon_class=Saccharomycetes phylum=Ascomycota tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
SCNpilot_expt_500_bf_scaffold_11598_3
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2150..2557
DNA (408bp) protein (136aa)
Transcriptional regulator, MerR family n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M045_METRJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACB24528.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_expt_500_bf_scaffold_11598_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2544..2957
DNA (414bp) protein (138aa)
Acetyltransferase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VUX3_RHILT
Acetyltransferase {ECO:0000313|EMBL:KFL25353.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
acetyltransferase
SCNpilot_expt_500_bf_scaffold_11598_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3014..4168)
DNA (1155bp) protein (385aa)
attK; NAD-dependent succinate aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
NAD-dependent succinate aldehyde dehydrogenase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K3X5_AGRVS
NAD-dependent succinate aldehyde dehydrogenase {ECO:0000313|EMBL:ACM39630.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
Displaying 5 items

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