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SCNpilot_expt_500_bf_scaffold_8315

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8315_1
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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155..970
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M83_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61492.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_expt_500_bf_scaffold_8315_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1005..1472)
DNA (468bp) protein (156aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21]
Beta-glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB5_PELHB
SCNpilot_expt_500_bf_scaffold_8315_3
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2378..2875)
DNA (498bp) protein (166aa)
Putative acetyltransferase, GNAT family n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1ICE2_PSEE4
acetyltransferase
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:CAK14671.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
SCNpilot_expt_500_bf_scaffold_8315_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2879..3901)
DNA (1023bp) protein (341aa)
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB4_PELHB rbh
Scaffold protein for [4Fe-4S] cluster assembly Apb C, MRP-like {ECO:0000313|EMBL:CDP52761.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein; K03593 ATP-binding protein involved in chromosome partitioning rbh
SCNpilot_expt_500_bf_scaffold_8315_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3918..4898)
DNA (981bp) protein (327aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
transaldolase; K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB3_PELHB
SCNpilot_expt_500_bf_scaffold_8315_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4981..6165)
DNA (1185bp) protein (395aa)
Aspartate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB2_PELHB
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KKB08424.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
aspartate aminotransferase
SCNpilot_expt_500_bf_scaffold_8315_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6342..7268)
DNA (927bp) protein (309aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R5Z3_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB06704.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit
SCNpilot_expt_500_bf_scaffold_8315_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7268..8026)
DNA (759bp) protein (253aa)
Electron transfer flavoprotein beta-subunit (Beta-ETF) (Electron transfer flavoprotein small subunit) (ETFSS) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S8M6_9BRAD
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:CDP52757.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit
SCNpilot_expt_500_bf_scaffold_8315_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8330..9490
DNA (1161bp) protein (387aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J244_POLGS
Amidohydrolase {ECO:0000313|EMBL:KFL27726.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_500_bf_scaffold_8315_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9591..10643
DNA (1053bp) protein (351aa)
Putative ammonia monooxygenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA8_PELHB rbh
Bll1341 protein {ECO:0000313|EMBL:CDP52755.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative ammonia monooxygenase; K07120 rbh
SCNpilot_expt_500_bf_scaffold_8315_11
unknown

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10763..11083
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8315_12
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11093..12040)
DNA (948bp) protein (316aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:CDP52751.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CDP52751.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
maltodextrin glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20]
Maltodextrin glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA4_PELHB
Displaying 12 items

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