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SCNpilot_expt_500_bf_scaffold_8451

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8451_1
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..840
DNA (840bp) protein (280aa)
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F3301
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKC34351.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
extracellular solute-binding protein
SCNpilot_expt_500_bf_scaffold_8451_2
unknown

Not on your lists

comp(936..1352)
DNA (417bp) protein (139aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8451_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1358..1819
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000361C467
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KFC72361.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_expt_500_bf_scaffold_8451_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2166..2627
DNA (462bp) protein (154aa)
ABC transporter permease n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000307A4C2
ABC transporter permease {ECO:0000313|EMBL:KKB82404.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
binding-protein-dependent transport system inner membrane protein
SCNpilot_expt_500_bf_scaffold_8451_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2624..3430
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003772BC7 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB11709.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ABC transporter rbh
SCNpilot_expt_500_bf_scaffold_8451_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3427..4173
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E8371 rbh
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:CDP51040.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter rbh
SCNpilot_expt_500_bf_scaffold_8451_7
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4202..4999
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A67AC rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC72357.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein; K09164 hypothetical protein
SCNpilot_expt_500_bf_scaffold_8451_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5015..5461)
DNA (447bp) protein (149aa)
UPI0003CF2BF7 related cluster n=1 Tax=unknown RepID=UPI0003CF2BF7
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:CDP51467.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8451_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5534..5932)
DNA (399bp) protein (133aa)
NADPH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
NADPH-dependent FMN reductase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M3N4_METRJ
Uncharacterized protein {ECO:0000313|EMBL:KKB08473.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_expt_500_bf_scaffold_8451_10
unknown

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comp(5929..6126)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8451_11
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6304..6780)
DNA (477bp) protein (159aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
UDP-glucose 6-dehydrogenase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2GR55_9BURK
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ESH92571.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
SCNpilot_expt_500_bf_scaffold_8451_12
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6791..7606
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016A7A0A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA49950.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_expt_500_bf_scaffold_8451_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7766..9202)
DNA (1437bp) protein (479aa)
Mannose-1-phosphate guanyltransferase {ECO:0000313|EMBL:KKB77289.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KKB77289.1};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
bifunctional mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase protein (EC:5.3.1.8 2.7.7.13)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037E9B91
SCNpilot_expt_500_bf_scaffold_8451_14
unknown

Not on your lists

9492..10124
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8451_15
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10138..10635)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NKU0_RHISP
Uncharacterized protein {ECO:0000313|EMBL:KKB75928.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8451_16
unknown

Not on your lists

comp(10731..10979)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_8451_17
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11112..11534)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQN4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM71886.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_8451_18
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11622..11801
DNA (180bp) protein (60aa)
Putative transcriptional regulator n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQN3_9RHIZ
Putative transcriptional regulator {ECO:0000313|EMBL:EIM71885.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
putative transcriptional regulator
Displaying 18 items

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