ggKbase home page

SCNpilot_expt_500_bf_scaffold_8913

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8913_1
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..884)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EM21_METSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51410.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_expt_500_bf_scaffold_8913_2
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(988..2226)
DNA (1239bp) protein (413aa)
Glycosyl transferase n=1 Tax=Sphingomonas sp. LH128 RepID=J8W3M6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKB11059.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
glycosyl transferase family 1; K03208 colanic acid biosynthesis glycosyl transferase WcaI
SCNpilot_expt_500_bf_scaffold_8913_3
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2214..3170)
DNA (957bp) protein (319aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
GDP-L-fucose synthase (EC:1.1.1.271); K02377 GDP-L-fucose synthase [EC:1.1.1.271] rbh
GDP-L-fucose synthase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A0A96 rbh
SCNpilot_expt_500_bf_scaffold_8913_4
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3170..4237)
DNA (1068bp) protein (356aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FN68_9RHIZ rbh
SCNpilot_expt_500_bf_scaffold_8913_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4526..6250)
DNA (1725bp) protein (575aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Signal transduction histidine kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGE8_PELHB rbh
signal transduction histidine kinase rbh
SCNpilot_expt_500_bf_scaffold_8913_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6311..7219)
DNA (909bp) protein (303aa)
Mercuric ion reductase {ECO:0000313|EMBL:CDP51561.1}; EC=1.16.1.1 {ECO:0000313|EMBL:CDP51561.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00520 mercuric reductase [EC:1.16.1.1]
Pyridine nucleotide-disulfide oxidoreductase dimerization subunit n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQV6_9RHIZ
SCNpilot_expt_500_bf_scaffold_8913_7
unknown

Not on your lists

7414..7833
DNA (420bp) protein (140aa)

This feature has no annotations

Displaying 7 items

View Taxonomy