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SCNpilot_expt_500_bf_scaffold_8915

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_8915_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..85)
DNA (84bp) protein (28aa)
AP endonuclease {ECO:0000313|EMBL:KKB80907.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_expt_500_bf_scaffold_8915_2
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(126..2156)
DNA (2031bp) protein (677aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z266_9RHIZ rbh
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EIM30308.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
glucose-methanol-choline oxidoreductase rbh
SCNpilot_expt_500_bf_scaffold_8915_3
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2177..2338)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035D61E1
ABC transporter permease {ECO:0000313|EMBL:KHL03556.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
transport protein; K02026 multiple sugar transport system permease protein
SCNpilot_expt_500_bf_scaffold_8915_4
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2977..3876)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003797063
Transporter {ECO:0000313|EMBL:KIC68939.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_expt_500_bf_scaffold_8915_5
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3906..5204)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A8D2C rbh
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ABK01976.1}; Flags: Precursor;; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_expt_500_bf_scaffold_8915_6
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6166..6498
DNA (333bp) protein (111aa)
LacI family transcriptional regulator (EC:5.1.1.1); K02529 LacI family transcriptional regulator
Putative transcriptional regulator, LacI family protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CHJ1_9RHOB
Putative transcriptional regulator, LacI family protein {ECO:0000313|EMBL:EAR52048.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 /; HTCC2516).;"
SCNpilot_expt_500_bf_scaffold_8915_7
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6646..7203)
DNA (558bp) protein (186aa)
xylose isomerase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003646478
Sugar phosphate isomerase {ECO:0000313|EMBL:KKB79243.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
sugar phosphate isomerase/epimerase
SCNpilot_expt_500_bf_scaffold_8915_8
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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7504..7959
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036261DC
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADG07273.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Displaying 8 items

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