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SCNpilot_expt_500_bf_scaffold_5719

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5719_1
unknown

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comp(2..64)
DNA (63bp) protein (21aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5719_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(179..1000)
DNA (822bp) protein (274aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CDP53766.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CDP53766.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF42_PELHB
SCNpilot_expt_500_bf_scaffold_5719_3
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1088..2029)
DNA (942bp) protein (314aa)
Cell division protein FtsX n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF36_PELHB rbh
Cell division protein FtsX {ECO:0000313|EMBL:KFC65415.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cell division protein FtsX; K09811 cell division transport system permease protein rbh
SCNpilot_expt_500_bf_scaffold_5719_4
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2019..2678)
DNA (660bp) protein (220aa)
Cell division transporter, ATP-binding protein FtsE n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF38_PELHB rbh
Cell division protein FtsE {ECO:0000313|EMBL:KKB77635.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
cell division transporter ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein rbh
SCNpilot_expt_500_bf_scaffold_5719_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2848..3789
DNA (942bp) protein (314aa)
MJ0042 family finger-like domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF39_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP53381.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
MJ0042 family finger-like domain-containing protein
SCNpilot_expt_500_bf_scaffold_5719_6
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3789..4199
DNA (411bp) protein (137aa)
Two-component response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH4_PELHB
MFS transporter {ECO:0000313|EMBL:KFL25824.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
two-component response regulator
SCNpilot_expt_500_bf_scaffold_5719_7
unknown

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4257..4688
DNA (432bp) protein (144aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_5719_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4685..5140)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A3W2_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY98015.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
SCNpilot_expt_500_bf_scaffold_5719_9
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5837..6202
DNA (366bp) protein (122aa)
LrgA family protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TJ0_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KFL25822.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
LrgA family protein
SCNpilot_expt_500_bf_scaffold_5719_10
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6199..6915
DNA (717bp) protein (239aa)
LrgB family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIU7_METSB rbh
Membrane protein {ECO:0000313|EMBL:KFL25821.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
LrgB family protein rbh
SCNpilot_expt_500_bf_scaffold_5719_11
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7079..8320)
DNA (1242bp) protein (414aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] rbh
Diaminopimelate decarboxylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFH6_PELHB rbh
SCNpilot_expt_500_bf_scaffold_5719_12
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8459..8809)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364CBAE
Uncharacterized protein {ECO:0000313|EMBL:KJS09909.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
cation transport protein (ChaC); K07232 cation transport protein ChaC
Displaying 12 items

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