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SCNpilot_expt_500_bf_scaffold_5755

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5755_1
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..925
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PLH6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFC66428.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5755_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1032..2882
DNA (1851bp) protein (617aa)
UPI0003CF0396 related cluster n=1 Tax=unknown RepID=UPI0003CF0396 rbh
Putative Glutathione-regulated potassium-efflux sy stem protein KefB {ECO:0000313|EMBL:CDP50873.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glutathione-regulated potassium-efflux system protein; K11747 glutathione-regulated potassium-efflux system protein KefB rbh
SCNpilot_expt_500_bf_scaffold_5755_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3867..5672
DNA (1806bp) protein (602aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glycogen phosphorylase; K00688 starch phosphorylase [EC:2.4.1.1]
Phosphorylase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG44_PELHB
SCNpilot_expt_500_bf_scaffold_5755_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5679..7871
DNA (2193bp) protein (731aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG43_PELHB
SCNpilot_expt_500_bf_scaffold_5755_5
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8834..9169
DNA (336bp) protein (112aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
glucose-1-phosphate adenylyltransferase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
Glucose-1-phosphate adenylyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG42_PELHB
SCNpilot_expt_500_bf_scaffold_5755_6
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9671..10624
DNA (954bp) protein (318aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
glycogen synthase, ADP-glucose transglucosylase; K00703 starch synthase [EC:2.4.1.21]
Glycogen synthase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG41_PELHB
SCNpilot_expt_500_bf_scaffold_5755_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11152..11820
DNA (669bp) protein (223aa)
Phosphoglucomutase {ECO:0000313|EMBL:CDP50867.1}; EC=5.4.2.2 {ECO:0000313|EMBL:CDP50867.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2]
Phosphoglucomutase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG40_PELHB
SCNpilot_expt_500_bf_scaffold_5755_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12045..14327
DNA (2283bp) protein (761aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glycogen debranching protein; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen debranching enzyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG39_PELHB rbh
SCNpilot_expt_500_bf_scaffold_5755_9
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14399..15709
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A630_9PROT rbh
Hemolysin C {ECO:0000313|EMBL:KKC40866.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
transporter protein rbh
SCNpilot_expt_500_bf_scaffold_5755_10
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15719..16189)
DNA (471bp) protein (157aa)
Acetyltransferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YYW6_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:EIM29158.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
GNAT family acetyltransferase
SCNpilot_expt_500_bf_scaffold_5755_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16294..16905
DNA (612bp) protein (204aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Cronobacter dublinensis 582 RepID=K8BAT2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KKB12818.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5755_12
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16953..17585)
DNA (633bp) protein (211aa)
Urease accessory protein UreG n=1 Tax=Nitratireductor indicus C115 RepID=K2NYT8_9RHIZ rbh
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_expt_500_bf_scaffold_5755_13
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17582..18010)
DNA (429bp) protein (143aa)
Putative membrane protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2C0_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KKB84963.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_5755_14
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18007..18426)
DNA (420bp) protein (140aa)
Urease accessory protein UreF n=1 Tax=Nitratireductor indicus C115 RepID=K2N6B3_9RHIZ
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
urease accessory protein UreF; K03188 urease accessory protein
Displaying 14 items

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