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SCNpilot_expt_500_bf_scaffold_5909

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5909_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..150)
DNA (150bp) protein (50aa)
Prephenate dehydratase {ECO:0000313|EMBL:KFL25779.1}; EC=4.2.1.51 {ECO:0000313|EMBL:KFL25779.1};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT2_PELHB
SCNpilot_expt_500_bf_scaffold_5909_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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555..1205
DNA (651bp) protein (217aa)
Membrane c-type cytochrome cy n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL25780.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
membrane c-type cytochrome cy; K08738 cytochrome c
SCNpilot_expt_500_bf_scaffold_5909_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1276..2223
DNA (948bp) protein (316aa)
D-3-phosphoglycerate dehydrogenase; K12972 gyoxylate/hydroxypyruvate reductase A [EC:1.1.1.79 1.1.1.81] rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFT0_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL25781.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCNpilot_expt_500_bf_scaffold_5909_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2257..3174)
DNA (918bp) protein (306aa)
Putative transcriptional regulator, MarR family N-acetyltransferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TS72_9BRAD
MarR family transcriptional regulator {ECO:0000313|EMBL:KFL24801.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative transcriptional regulator, MarR family
SCNpilot_expt_500_bf_scaffold_5909_5
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3207..4550)
DNA (1344bp) protein (448aa)
Leucine aminopeptidase 2, chloroplastic {ECO:0000256|SAAS:SAAS00070899}; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00279693};; EC=3.4.11.1 {ECO:0000256|SAAS:SAAS00070892};; Leucine aminopeptidase 3, chloroplastic {ECO:0000256|SAAS:SAAS00070897}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
peptidase B; K01255 leucyl aminopeptidase [EC:3.4.11.1]
Peptidase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS9_PELHB
SCNpilot_expt_500_bf_scaffold_5909_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4714..5502
DNA (789bp) protein (263aa)
TPR repeat protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS8_PELHB
Flp pilus assembly protein TadD, contains TPR repe at {ECO:0000313|EMBL:CDP53405.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
TPR repeat protein
SCNpilot_expt_500_bf_scaffold_5909_7
unknown

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5918..6424
DNA (507bp) protein (169aa)

This feature has no annotations

Displaying 7 items

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