name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_3269_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..566)
|
Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JQ66_HYPDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ21987.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
|
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SCNpilot_expt_500_bf_scaffold_3269_2
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(553..957)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CXK9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN14749.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_3269_3
unknown
|
Not on your lists |
comp(995..1804)
|
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B71A4E
|
|
SCNpilot_expt_500_bf_scaffold_3269_4
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2303..4546)
|
Excinuclease ABC subunit A n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SK56_9DELT
rbh
Daunorubicin resistance protein DrrC {ECO:0000313|EMBL:KKC37835.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
snorO; nogalamycin resistance protein SnorO
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3269_5
unknown
|
Not on your lists |
comp(4630..4842)
|
This feature has no annotations |
|
SCNpilot_expt_500_bf_scaffold_3269_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4900..5580)
|
Putative ABC transporter transmembrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF58_PELHB
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative ABC transporter transmembrane protein; K09686 antibiotic transport system permease protein
|
|
SCNpilot_expt_500_bf_scaffold_3269_7
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5846..6793)
|
ABC-type multidrug transport system, ATPase component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF57_PELHB
rbh
ABC transporter {ECO:0000313|EMBL:KKB13325.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3269_8
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7029..7829
|
Transcriptional regulator, TetR family n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D8L2_MYXXD
rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KFL31359.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
TetR family transcriptional regulator
rbh
|
|
SCNpilot_expt_500_bf_scaffold_3269_9
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7861..8268
|
Ribosome-binding factor A n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R996_PELHB
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
ribosome-binding factor A; K02834 ribosome-binding factor A
|
|
SCNpilot_expt_500_bf_scaffold_3269_10
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8265..9161
|
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
tRNA pseudouridine synthase B n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R997_PELHB
|
|
SCNpilot_expt_500_bf_scaffold_3269_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9257..10981
|
Chemotaxis protein methyltransferase CheR n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R998_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB13319.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
chemotaxis protein CheR
|
|
SCNpilot_expt_500_bf_scaffold_3269_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11114..11383
|
30S ribosomal protein S15 n=1 Tax=Methylocystis parvus RepID=UPI0003006027
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
|
|
SCNpilot_expt_500_bf_scaffold_3269_13
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12967..13098)
|
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
|
|
SCNpilot_expt_500_bf_scaffold_3269_14
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13267..13779
|
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Polyribonucleotide nucleotidyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9A0_PELHB
|
|
SCNpilot_expt_500_bf_scaffold_3269_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14047..15084)
|
Sugar phosphate permease n=1 Tax=Polaromonas sp. CF318 RepID=J2KAZ5_9BURK
Sugar phosphate permease {ECO:0000313|EMBL:EJL77420.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
major facilitator transporter; K08167 MFS transporter, DHA2 family, methyl viologen resistance protein SmvA
|
|
SCNpilot_expt_500_bf_scaffold_3269_16
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria
|
Not on your lists |
15719..16003
|
msrA; peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:CAL66558.1}; EC=1.8.4.11 {ECO:0000313|EMBL:CAL66558.1};; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain KT0803).;"
Peptide methionine sulfoxide reductase n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M1R3_GRAFK
|
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SCNpilot_expt_500_bf_scaffold_3269_17
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16023..16628)
|
TetR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HZW1_9RHIZ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KFC66665.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
transcriptional regulator, TetR family
|
|
SCNpilot_expt_500_bf_scaffold_3269_18
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16756..17154
|
ABC transporter, permease protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F545_9RHIZ
Multidrug resistance protein {ECO:0000313|EMBL:KFC66664.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
major facilitator superfamily protein
|