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SCNpilot_expt_500_bf_scaffold_10170

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_10170_1
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000369BAD7
Amidohydrolase {ECO:0000313|EMBL:KKB77764.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
amidohydrolase 2; K07046
SCNpilot_expt_500_bf_scaffold_10170_2
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(263..907)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R828_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB84928.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10170_3
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(904..1341)
DNA (438bp) protein (146aa)
RNA polymerase sigma-70 factor n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R827_PELHB
RNA polymerase sigma factor {ECO:0000313|EMBL:KKB85022.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_500_bf_scaffold_10170_4
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1570..2271
DNA (702bp) protein (234aa)
hypothetical protein n=2 Tax=Xanthobacteraceae RepID=UPI00037BB3B9
Uncharacterized protein {ECO:0000313|EMBL:KKB09997.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_10170_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2315..3292)
DNA (978bp) protein (326aa)
Putative oxidoreductase related to N-acetylglucosamine utilization n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDX9_PELHB rbh
putative oxidoreductase related to N-acetylglucosamine utilization rbh
Putative oxidoreductase related to N-acetylglucosamine utilization {ECO:0000313|EMBL:AEQ53891.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_expt_500_bf_scaffold_10170_6
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3568..4341
DNA (774bp) protein (258aa)
Transcriptional regulator n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KGJ1_MESAW rbh
Phage tail protein {ECO:0000313|EMBL:KKB13708.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_10170_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4363..5400
DNA (1038bp) protein (346aa)
Glucosamine-6-phosphate deaminase [isomerizing], a lternative {ECO:0000313|EMBL:CDP50743.1}; EC=3.5.99.6 {ECO:0000313|EMBL:CDP50743.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glucosamine-6-phosphate deaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]
UPI0003CFF6D9 related cluster n=1 Tax=unknown RepID=UPI0003CFF6D9
SCNpilot_expt_500_bf_scaffold_10170_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5492..6619
DNA (1128bp) protein (376aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YA08_9RHIZ
Displaying 8 items

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