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SCNpilot_expt_500_bf_scaffold_17671

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_17671_1
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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708..1517
DNA (810bp) protein (270aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1337887 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium 229E.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F8B27
ATPase domain-containing protein
SCNpilot_expt_500_bf_scaffold_17671_2
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1676..2305
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1X0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EEW25068.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;"
putative signal peptide protein
SCNpilot_expt_500_bf_scaffold_17671_3
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2323..3123
DNA (801bp) protein (267aa)
UPI0003D06D7F related cluster n=1 Tax=unknown RepID=UPI0003D06D7F
Membrane protein {ECO:0000313|EMBL:KFL28126.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
uncharacterized membrane-anchored protein
SCNpilot_expt_500_bf_scaffold_17671_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3270..3863
DNA (594bp) protein (198aa)
XRE family transcriptional regulator n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003787C0B rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KFL28125.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
copR1; transcriptional activator protein CopR rbh
SCNpilot_expt_500_bf_scaffold_17671_5
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3856..4935
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YA70_MESOW
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_17671_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4913..5173
DNA (261bp) protein (87aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
histidine kinase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003662A17
two-component sensor histidine kinase
SCNpilot_expt_500_bf_scaffold_17671_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5294..5704
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC31838.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_17671_8
unknown

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comp(5886..6056)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_17671_9
unknown

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comp(6053..6427)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_17671_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6561..6986)
DNA (426bp) protein (142aa)
Methionine sulfoxide reductase B {ECO:0000313|EMBL:CCV10926.1}; EC=1.8.4.11 {ECO:0000313|EMBL:CCV10926.1};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator; K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine sulfoxide reductase B n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3S0_9RHIZ
SCNpilot_expt_500_bf_scaffold_17671_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7083..7928)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M929_RHIL3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB11278.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein rbh
SCNpilot_expt_500_bf_scaffold_17671_12
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7940..8167)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEX0_RHIET
Uncharacterized protein {ECO:0000313|EMBL:KKB11371.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_17671_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9292..9960
DNA (669bp) protein (223aa)
Transcriptional regulator n=2 Tax=Rhizobium leguminosarum RepID=J0US33_RHILV rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB11279.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
GntR family transcriptional regulator rbh
SCNpilot_expt_500_bf_scaffold_17671_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10027..10335
DNA (309bp) protein (103aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0JHZ6_RHILV
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHF88590.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
putative periplasmic binding protein component of ABC transporter
SCNpilot_expt_500_bf_scaffold_17671_15
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10353..10922
DNA (570bp) protein (190aa)
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q526_RHIE6
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB11280.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative sugar ABC transporter substrate-binding protein
Displaying 15 items

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